RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W RTK1Q12100 620 aaPredicted RBP11.18□□□□□ -0.62
PTP1YDL230W YBR298C-AQ8TGK4 73 aa11.18□□□□□ -0.62
PTP1YDL230W QCR7P00128 127 aa11.17□□□□□ -0.62
PTP1YDL230W PDA1P16387 420 aaKnown RBP11.17□□□□□ -0.62
PTP1YDL230W CPR2P23285 205 aa11.17□□□□□ -0.62
PTP1YDL230W PET112P33893 541 aa11.17□□□□□ -0.62
PTP1YDL230W MTC4P38335 694 aaKnown RBP11.17□□□□□ -0.62
PTP1YDL230W BNA6P43619 295 aa11.17□□□□□ -0.62
PTP1YDL230W YJR115WP47152 169 aa11.17□□□□□ -0.62
PTP1YDL230W MRPL50P53724 139 aa11.17□□□□□ -0.62
PTP1YDL230W RPL6AQ02326 176 aaKnown RBP11.17□□□□□ -0.62
PTP1YDL230W MRPS16Q02608 121 aa11.17□□□□□ -0.62
PTP1YDL230W EKI1Q03764 534 aa11.17□□□□□ -0.62
PTP1YDL230W SSY1Q03770 852 aa11.17□□□□□ -0.62
PTP1YDL230W INP53Q12271 1107 aa11.17□□□□□ -0.62
PTP1YDL230W COX9P07255 59 aa11.16□□□□□ -0.62
PTP1YDL230W NCP1P16603 691 aaKnown RBP11.16□□□□□ -0.62
PTP1YDL230W RPB8P20436 146 aa11.16□□□□□ -0.62
PTP1YDL230W ERG24P32462 438 aaKnown RBP11.16□□□□□ -0.62
PTP1YDL230W MRPL15P36523 253 aa11.16□□□□□ -0.62
PTP1YDL230W VBA2P38358 474 aaKnown RBP11.16□□□□□ -0.62
PTP1YDL230W YHR122WP38829 231 aa11.16□□□□□ -0.62
PTP1YDL230W PKP1P40530 394 aa11.16□□□□□ -0.62
PTP1YDL230W CAT5P41735 233 aa11.16□□□□□ -0.62
PTP1YDL230W AIM36Q03798 255 aa11.16□□□□□ -0.62
PTP1YDL230W BBP1Q12365 385 aa11.16□□□□□ -0.62
PTP1YDL230W PRP46Q12417 451 aaPredicted RBP11.16□□□□□ -0.62
PTP1YDL230W PAD1P33751 242 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
PTP1YDL230W SNO3P43544 222 aa11.15□□□□□ -0.62
PTP1YDL230W LYS20P48570 428 aaKnown RBP11.15□□□□□ -0.62
PTP1YDL230W SNP1Q00916 300 aaPredicted RBP11.15□□□□□ -0.62
PTP1YDL230W COX20Q04935 205 aa11.15□□□□□ -0.62
PTP1YDL230W PAL1Q05518 499 aaKnown RBP11.15□□□□□ -0.62
PTP1YDL230W MCP1Q12106 302 aa11.15□□□□□ -0.62
PTP1YDL230W LYS21Q12122 440 aaKnown RBP11.15□□□□□ -0.62
PTP1YDL230W ARF1P11076 181 aaKnown RBP11.14□□□□□ -0.63
PTP1YDL230W NUP1P20676 1076 aa11.14□□□□□ -0.63
PTP1YDL230W YCP4P25349 247 aaKnown RBP11.14□□□□□ -0.63
PTP1YDL230W FAA1P30624 700 aaKnown RBP11.14□□□□□ -0.63
PTP1YDL230W ATS1P31386 333 aa11.14□□□□□ -0.63
PTP1YDL230W HSP150P32478 413 aa11.14□□□□□ -0.63
PTP1YDL230W KRE6P32486 720 aa11.14□□□□□ -0.63
PTP1YDL230W SFK1P35735 353 aa11.14□□□□□ -0.63
PTP1YDL230W GPX1P36014 167 aa11.14□□□□□ -0.63
PTP1YDL230W UTH1P36135 365 aa11.14□□□□□ -0.63
PTP1YDL230W YHR180WP38868 163 aa11.14□□□□□ -0.63
PTP1YDL230W YGR266WP53326 701 aa11.14□□□□□ -0.63
PTP1YDL230W SIZ1Q04195 904 aa11.14□□□□□ -0.63
PTP1YDL230W COQ10Q08058 207 aa11.14□□□□□ -0.63
PTP1YDL230W ENB1Q08299 606 aa11.14□□□□□ -0.63
PTP1YDL230W RNA14P25298 677 aaKnown RBP11.13□□□□□ -0.63
PTP1YDL230W ITR1P30605 584 aa11.13□□□□□ -0.63
PTP1YDL230W EMP70P32802 667 aa11.13□□□□□ -0.63
PTP1YDL230W TRS65P32893 560 aa11.13□□□□□ -0.63
PTP1YDL230W SLC1P33333 303 aa11.13□□□□□ -0.63
PTP1YDL230W BRR6P53062 197 aa11.13□□□□□ -0.63
PTP1YDL230W MPP6P53725 186 aaPredicted RBP11.13□□□□□ -0.63
PTP1YDL230W YLR460CP54007 376 aa11.13□□□□□ -0.63
PTP1YDL230W SEI1Q06058 285 aa11.13□□□□□ -0.63
PTP1YDL230W SKM1Q12469 655 aa11.13□□□□□ -0.63
PTP1YDL230W FAS1P07149 2051 aaKnown RBP11.13□□□□□ -0.63
PTP1YDL230W YER137CP40083 148 aaKnown RBP11.12□□□□□ -0.63
PTP1YDL230W YGR210CP42942 411 aa11.12□□□□□ -0.63
PTP1YDL230W MTL1P53214 551 aa11.12□□□□□ -0.63
PTP1YDL230W KEI1Q06346 221 aa11.12□□□□□ -0.63
PTP1YDL230W BAG7Q12128 409 aa11.12□□□□□ -0.63
PTP1YDL230W SET6Q12529 373 aa11.12□□□□□ -0.63
PTP1YDL230W RPS13P05756 151 aaKnown RBP11.11□□□□□ -0.63
PTP1YDL230W CNE1P27825 502 aa11.11□□□□□ -0.63
PTP1YDL230W MSN4P33749 630 aa11.11□□□□□ -0.63
PTP1YDL230W LST4P34239 828 aa11.11□□□□□ -0.63
PTP1YDL230W MRPL3P36516 390 aa11.11□□□□□ -0.63
PTP1YDL230W TCM62P38228 572 aaKnown RBP11.11□□□□□ -0.63
PTP1YDL230W SDS24P38314 527 aa11.11□□□□□ -0.63
PTP1YDL230W YHR210CP38893 341 aa11.11□□□□□ -0.63
PTP1YDL230W YJL193WP39542 402 aa11.11□□□□□ -0.63
PTP1YDL230W SLS1P42900 643 aa11.11□□□□□ -0.63
PTP1YDL230W AIM25P47140 327 aa11.11□□□□□ -0.63
PTP1YDL230W FMP48P53233 369 aa11.11□□□□□ -0.63
PTP1YDL230W ASI3P53983 676 aa11.11□□□□□ -0.63
PTP1YDL230W RSM28Q03430 361 aa11.11□□□□□ -0.63
PTP1YDL230W YMR130WQ04223 302 aa11.11□□□□□ -0.63
PTP1YDL230W MRPL1Q04599 285 aa11.11□□□□□ -0.63
PTP1YDL230W YOL036WQ08206 761 aa11.11□□□□□ -0.63
PTP1YDL230W RLM1Q12224 676 aa11.11□□□□□ -0.63
PTP1YDL230W BAP3P41815 604 aa11.1□□□□□ -0.63
PTP1YDL230W YGL204CP53089 101 aa11.1□□□□□ -0.63
PTP1YDL230W GAS2Q06135 555 aa11.1□□□□□ -0.63
PTP1YDL230W PEX30Q06169 523 aa11.1□□□□□ -0.63
PTP1YDL230W YNG1Q08465 219 aa11.1□□□□□ -0.63
PTP1YDL230W RTC5Q12108 567 aaKnown RBP11.1□□□□□ -0.63
PTP1YDL230W YOR343CQ12484 108 aa11.1□□□□□ -0.63
PTP1YDL230W OPI3P05375 206 aa11.09□□□□□ -0.63
PTP1YDL230W CYT1P07143 309 aa11.09□□□□□ -0.63
PTP1YDL230W GLK1P17709 500 aaKnown RBP11.09□□□□□ -0.63
PTP1YDL230W SHR5P41912 237 aa11.09□□□□□ -0.63
PTP1YDL230W VHT1P53241 593 aa11.09□□□□□ -0.63
PTP1YDL230W RHO5P53879 331 aaKnown RBP11.09□□□□□ -0.63
PTP1YDL230W BUD25P85052 153 aa11.09□□□□□ -0.63
PTP1YDL230W YMR210WQ03649 449 aa11.09□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms