RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ARMCX5Q6P1M9 558 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 FRMD5Q7Z6J6 570 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 LRRC8AQ8IWT6 810 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 TCP11Q8WWU5 503 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 BADQ92934 168 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 JPH2Q9BR39 696 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-221ENST00000641573 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
PHGDH-221ENST00000641573 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
PHGDH-221ENST00000641573 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 ZNF215Q9UL58 517 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-221ENST00000641573 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 IGKV6-21A0A0C4DH24 114 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 A0A1W2PQC6 194 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 ESPNB1AK53 854 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 GAS2O43903 313 aaKnown RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 AKAP3O75969 853 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 INSRRP14616 1297 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 ABCD1P33897 745 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 NAMPTP43490 491 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 SNRPFP62306 86 aaKnown RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 LRMPQ12912 555 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 MYBPC2Q14324 1141 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 TLK2Q86UE8 772 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 SLC9A9Q8IVB4 645 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 MAP4K3Q8IVH8 894 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 TRIM59Q8IWR1 403 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 DEPTORQ8TB45 409 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 TRAPPC12Q8WVT3 735 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 AP5M1Q9H0R1 490 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 SUGCTQ9HAC7 445 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 METTL14Q9HCE5 456 aaKnown RBP14.34□□□□□ -0.11
PHGDH-221ENST00000641573 ARHGAP28Q9P2N2 729 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■□□□□ 10.9
PHGDH-221ENST00000641573 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 CDH23Q9H251 3354 aa14.34□□□□□ -0.11
PHGDH-221ENST00000641573 A6NJR5 290 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 H3BRB1 525 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 SCP2P22307 547 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 PSMC2P35998 433 aaKnown RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 CASP4P49662 377 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 CYP2J2P51589 502 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 IGBP1P78318 339 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 GOLGA8FQ08AF8 430 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 GOLGA8DPQ0D2H9 430 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 DRP2Q13474 957 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 C12orf56Q8IXR9 622 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 LRRC71Q8N4P6 559 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 PRPF31Q8WWY3 499 aaKnown RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 KCNN1Q92952 543 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 MKNK1Q9BUB5 465 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 TUT1Q9H6E5 874 aaKnown RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 ARMCX3Q9UH62 379 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 Q9Y3F1 56 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.12
PHGDH-221ENST00000641573 COL1A2P08123 1366 aa14.33□□□□□ -0.12
PHGDH-221ENST00000641573 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 TISP43B9A030 160 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 ANKRD63C9JTQ0 380 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 EXOC3O60645 756 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 C22orf31O95567 290 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 AKR1A1P14550 325 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 MSNP26038 577 aaKnown RBP14.32□□□□□ -0.12
PHGDH-221ENST00000641573 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 RBL2Q08999 1139 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 CAPSQ13938 189 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 SYCP1Q15431 976 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 EFCAB12Q6NXP0 572 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 TAS1R3Q7RTX0 852 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 FAM186BQ8IYM0 893 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 TMEM174Q8WUU8 243 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 PSPC1Q8WXF1 523 aaKnown RBP14.32□□□□□ -0.12
PHGDH-221ENST00000641573 ERGIC2Q96RQ1 377 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 SUCLA2Q9P2R7 463 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-221ENST00000641573 FRMD4BQ9Y2L6 1034 aa14.32□□□□□ -0.12
PHGDH-221ENST00000641573 AKR1B15C9JRZ8 316 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-221ENST00000641573 MAGEB2O15479 319 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 TPM1P09493 284 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 CYBAP13498 195 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 KLRC1P26715 233 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 CPT1AP50416 773 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 ADKP55263 362 aaKnown RBP14.31□□□□□ -0.12
PHGDH-221ENST00000641573 CCZ1BP86790 482 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 CCZ1P86791 482 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-221ENST00000641573 LAMTOR4Q0VGL1 99 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 STRN3Q13033 797 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
PHGDH-221ENST00000641573 TRIM14Q14142 442 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms