RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 KLHL23Q8NBE8 558 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 BSNDQ8WZ55 320 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 CBWD1Q9BRT8 395 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 RMI1Q9H9A7 625 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 METTL14Q9HCE5 456 aaKnown RBP12.5□□□□□ -0.41
CLN6-217ENST00000636964 CEP72Q9P209 647 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 FRMD4BQ9Y2L6 1034 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 AKR1B10O60218 316 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 TLR2O60603 784 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
CLN6-217ENST00000636964 MAF1Q9H063 256 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 PAPPA2Q9BXP8 1791 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 SLC16A3O15427 465 aaKnown RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 STAM2O75886 525 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 PON1P27169 355 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.411e-7■■■■■ 41.2
CLN6-217ENST00000636964 MIS18BP1Q6P0N0 1132 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 RDM1Q8NG50 284 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 NFASCO94856 1347 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 GOLGA8JA6NMD2 632 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 ATP4AP20648 1035 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 UBA1P22314 1058 aaKnown RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 NPTX2P47972 431 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 FASTKD5Q7L8L6 764 aaKnown RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 ACCSQ96QU6 501 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 RABEP2Q9H5N1 569 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 AGPSO00116 658 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 OSBPP22059 807 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 KIF11P52732 1056 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 KRT83P78385 493 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 GFPT1Q06210 699 aaPredicted RBP12.49□□□□□ -0.41
CLN6-217ENST00000636964 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 CCDC170Q8IYT3 715 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 PORCNQ9H237 461 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 GANQ9H2C0 597 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 DMAC2Q9NW81 257 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 GCNT4Q9P109 453 aa12.49□□□□□ -0.41
CLN6-217ENST00000636964 MACROD2A1Z1Q3 448 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 DLG4P78352 724 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 SPA17Q15506 151 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
CLN6-217ENST00000636964 ZNF302Q9NR11 478 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CYP26B1Q9NR63 512 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 AJAP1Q9UKB5 411 aaPredicted RBP12.48□□□□□ -0.41
CLN6-217ENST00000636964 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 ERLIN2O94905 339 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CCT5P48643 541 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 SNAPC2Q13487 334 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 TMEM63BQ5T3F8 832 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CCDC181Q5TID7 509 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 SDR16C5Q8N3Y7 309 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 ANKRD13CQ8N6S4 541 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 CEP112Q8N8E3 955 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 HPCAL4Q9UM19 191 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 UBE4BO95155 1302 aa12.48□□□□□ -0.41
CLN6-217ENST00000636964 DENND3A2RUS2 1198 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 ENC1O14682 589 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 UCHL3P15374 230 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 GTF2BQ00403 316 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 CDK17Q00537 523 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 DMP1Q13316 513 aaPredicted RBP12.47□□□□□ -0.41
CLN6-217ENST00000636964 KCTD2Q14681 263 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 KLHDC7AQ5VTJ3 777 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 TMEM143Q96AN5 459 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 GDAP1L1Q96MZ0 367 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 MMP19Q99542 508 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 CPSF2Q9P2I0 782 aaKnown RBP12.47□□□□□ -0.41
CLN6-217ENST00000636964 WDR81Q562E7 1941 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 FAM170AA1A519 330 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 ARIH2O95376 493 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 GGPS1O95749 300 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 ICAM3P32942 547 aa12.47□□□□□ -0.41
CLN6-217ENST00000636964 SMTNP53814 917 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms