RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 COL9A1P20849 921 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 ARL2P36404 184 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 COASYQ13057 564 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 BMS1Q14692 1282 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 HAUS3Q68CZ6 603 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 MAEAQ7L5Y9 396 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 SMRP1Q8NCR6 262 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 NACC1Q96RE7 527 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 CNTNAP2Q9UHC6 1331 aa16.67■□□□□ 0.26
CACNA1A-230ENST00000636768 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 HIDE1A8MVS5 230 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 EYA4O95677 639 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 GLRA2P23416 452 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 AXLP30530 894 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 MBTD1Q05BQ5 628 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 NBR1Q14596 966 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 AGMOQ6ZNB7 445 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 MRPL10Q7Z7H8 261 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 MCPH1Q8NEM0 835 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 VN1R2Q8NFZ6 395 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 CCDC51Q96ER9 411 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 GPRC5CQ9NQ84 441 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 DBR1Q9UK59 544 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 ATG2AQ2TAZ0 1938 aa16.66■□□□□ 0.26
CACNA1A-230ENST00000636768 ARHGEF35A5YM69 484 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 ITGA4P13612 1032 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 U2AF2P26368 475 aaKnown RBP eCLIP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 RPA1P27694 616 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 TMEM31Q5JXX7 168 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 TMEM173Q86WV6 379 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 VPS52Q8N1B4 723 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 EIF2AQ9BY44 585 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 NFKBIZQ9BYH8 718 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 KANSL3Q9P2N6 904 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 DNAJB4Q9UDY4 337 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 USP15Q9Y4E8 981 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 IPPQ9Y573 584 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 PLXNA4Q9HCM2 1894 aa16.65■□□□□ 0.26
CACNA1A-230ENST00000636768 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 GALTP07902 379 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 ALADP13716 330 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 CCT6AP40227 531 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 SLC11A1P49279 550 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 PADI6Q6TGC4 694 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 ZNF280BQ86YH2 543 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 HACE1Q8IYU2 909 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 SMG8Q8ND04 991 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 IGSF21Q96ID5 467 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 APOL6Q9BWW8 343 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 LRWD1Q9UFC0 647 aa16.64■□□□□ 0.25
CACNA1A-230ENST00000636768 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 FAM86C2PA6NEL3 165 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 B4GALT5O43286 388 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 CXCL14O95715 111 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 POMCP01189 267 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 PTGDRQ13258 359 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 AMHR2Q16671 573 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 DDX53Q86TM3 631 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 ZBTB8OSQ8IWT0 167 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 BCL7CQ8WUZ0 217 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 CASP10Q92851 521 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 TMX3Q96JJ7 454 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 ZBP1Q9H171 429 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 HES2Q9Y543 173 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
CACNA1A-230ENST00000636768 DCXO43602 365 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 B4GALT3O60512 393 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 DDHD2O94830 711 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 MUTP22033 750 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 MLH1P40692 756 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 AFF1P51825 1210 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 ANKRD54Q6NXT1 300 aa16.62■□□□□ 0.25
CACNA1A-230ENST00000636768 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms