RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
CLN6-211ENST00000635754 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
CLN6-211ENST00000635754 PCDHB7Q9Y5E2 793 aa17.07■□□□□ 0.32
CLN6-211ENST00000635754 COL4A6Q14031 1691 aa17.07■□□□□ 0.32
CLN6-211ENST00000635754 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 TMEM265A0A087WTH1 108 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 MYMKA6NI61 221 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 H0YCG3 227 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 K7ERI5 159 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 SLC16A4O15374 487 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 SKIP12755 728 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 MYOGP15173 224 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
CLN6-211ENST00000635754 FAM189BP81408 668 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 HTRA4P83105 476 aaPredicted RBP17.06■□□□□ 0.32
CLN6-211ENST00000635754 AMPD3Q01432 767 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 AMHR2Q16671 573 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
CLN6-211ENST00000635754 CCDC51Q96ER9 411 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 NKX2-4Q9H2Z4 354 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 ELAC1Q9H777 363 aaKnown RBP17.06■□□□□ 0.32
CLN6-211ENST00000635754 FAM105AQ9NUU6 356 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
CLN6-211ENST00000635754 ACKR2O00590 384 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 B4GALT5O43286 388 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 CA3P07451 260 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
CLN6-211ENST00000635754 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
CLN6-211ENST00000635754 ZNF697Q5TEC3 545 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 PPP2R2DQ66LE6 453 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 STAMQ92783 540 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 NTPCRQ9BSD7 190 aaKnown RBP17.05■□□□□ 0.32
CLN6-211ENST00000635754 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 HPSEQ9Y251 543 aa17.05■□□□□ 0.32
CLN6-211ENST00000635754 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 HOXA2O43364 376 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 DGKIO75912 1065 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 EOMESO95936 686 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 GAP43P17677 238 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SCP2P22307 547 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SYKP43405 635 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 NCKAP1LP55160 1127 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 FAM178BQ8IXR5 827 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 RNF169Q8NCN4 708 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 FNDC1Q4ZHG4 1894 aaPredicted RBP17.04■□□□□ 0.32
CLN6-211ENST00000635754 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 K7ENM7 598 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 N4BP3O15049 544 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 TRAK2O60296 914 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 IDEP14735 1019 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 ABCD1P33897 745 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 NDUFA8P51970 172 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 STRN3Q13033 797 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SLC27A1Q6PCB7 646 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
CLN6-211ENST00000635754 ZNF689Q96CS4 500 aaPredicted RBP17.04■□□□□ 0.32
CLN6-211ENST00000635754 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
CLN6-211ENST00000635754 RC3H2Q9HBD1 1191 aaKnown RBP17.04■□□□□ 0.32
CLN6-211ENST00000635754 SEL1LQ9UBV2 794 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
CLN6-211ENST00000635754 NLRC5Q86WI3 1866 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 ACTN4O43707 911 aaKnown RBP17.03■□□□□ 0.32
CLN6-211ENST00000635754 ZNF623O75123 536 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
CLN6-211ENST00000635754 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 HAUS6Q7Z4H7 955 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 SFR1Q86XK3 245 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 ABI1Q8IZP0 508 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 PGBD4Q96DM1 585 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 ADPGKQ9BRR6 497 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 MRPL4Q9BYD3 311 aaKnown RBP17.03■□□□□ 0.32
CLN6-211ENST00000635754 TRIM9Q9C026 710 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 ZNF576Q9H609 170 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 PANK4Q9NVE7 773 aa17.03■□□□□ 0.32
CLN6-211ENST00000635754 TTLL13PA6NNM8 815 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 EDN1P05305 212 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 FGFR1P11362 822 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.31
CLN6-211ENST00000635754 AFMP43652 599 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 ASIC1P78348 528 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 TAP1Q03518 808 aa17.02■□□□□ 0.31
CLN6-211ENST00000635754 BTG3Q14201 252 aaPredicted RBP17.02■□□□□ 0.31
CLN6-211ENST00000635754 ATF7IP2Q5U623 682 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms