RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 AP2B1P63010 937 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 FOXP4Q8IVH2 680 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 DCAF4Q8WV16 495 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TNIP3Q96KP6 325 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CYTH2Q99418 400 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 DBNLQ9UJU6 430 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ZHX2Q9Y6X8 837 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 LZTS3O60299 673 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 H2AFYO75367 372 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ACADMP11310 421 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 KRT20P35900 424 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PMS2P54278 862 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TAP1Q03518 808 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM132BQ14DG7 1078 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TRIP13Q15645 432 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 FASTKD1Q53R41 847 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM179Q6ZVK1 233 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ICA1LQ8NDH6 482 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 OR6J1Q8NGC5 347 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CEP95Q96GE4 821 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 MASTLQ96GX5 879 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 MRPS26Q9BYN8 205 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 USE1Q9NZ43 259 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 NRBP1Q9UHY1 535 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHGA4Q9Y5G9 962 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ASXL2Q76L83 1435 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 JAK2O60674 1132 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 DIAPH2O60879 1101 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TFRCP02786 760 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SDC4P31431 198 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 S100A5P33763 92 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SLC16A2P36021 539 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ST13P50502 369 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ADCK5Q3MIX3 580 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PREPLQ4J6C6 727 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CEP78Q5JTW2 689 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 KCTD16Q68DU8 428 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ERAP2Q6P179 960 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ENAHQ8N8S7 591 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SKA1Q96BD8 255 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 XPO6Q96QU8 1125 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ADAM22Q9P0K1 906 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PPARGC1AQ9UBK2 798 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 COL17A1Q9UMD9 1497 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TRAPPC8Q9Y2L5 1435 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 NBNO60934 754 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TADA3O75528 432 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ERVK-10P10266 1014 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 AMPD2Q01433 879 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 LVRNQ6Q4G3 990 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 THNSL1Q8IYQ7 743 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 HS6ST3Q8IZP7 471 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CCNYL1Q8N7R7 359 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SNX31Q8N9S9 440 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 DESI2Q9BSY9 194 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 RNF26Q9BY78 433 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SIK2Q9H0K1 926 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 EMILIN3Q9NT22 766 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 NMRK1Q9NWW6 199 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 HDAC6Q9UBN7 1215 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CFAP99D6REC4 459 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TNPO2O14787 897 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CYTH3O43739 400 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 LRG1P02750 347 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PCCAP05165 728 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 HPGDP15428 266 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 RGS2P41220 211 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 HIST2H2ACQ16777 129 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ICE2Q659A1 982 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 HIST2H2AA3Q6FI13 130 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TSPAN17Q96FV3 270 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 GOLPH3LQ9H4A5 285 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 PKP3Q9Y446 797 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ASB14A6NK59 587 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SRGAP2O75044 1071 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 KITP10721 976 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SREBF2Q12772 1141 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 MTFR1Q15390 333 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC8EQ6NSJ5 796 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 EPM2AIP1Q7L775 607 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 NLRP9Q7RTR0 991 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 KIRREL3Q8IZU9 778 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 UCMAQ8WVF2 138 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 VPS50Q96JG6 964 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 COA1Q9GZY4 146 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ZFYVE28Q9HCC9 887 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 GID8Q9NWU2 228 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ANAPC7Q9UJX3 599 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 NUP160Q12769 1436 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 UGGT2Q9NYU1 1516 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PRXQ9BXM0 1461 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ADCY9O60503 1353 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 STXBP3O00186 592 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PSMD14O00487 310 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 IGSF3O75054 1194 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms