RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RHPN2Q8IUC4 686 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 CRIPAKQ8N1N5 446 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 GPT2Q8TD30 523 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 C7orf25Q9BPX7 421 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 TIPINQ9BVW5 301 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 TRIM9Q9C026 710 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 BLZF1Q9H2G9 400 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 RWDD3Q9Y3V2 267 aa20.6■□□□□ 0.89
PNKP-224ENST00000631020 GPC3P51654 580 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 CUL4BQ13620 913 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 LINC01599Q8WXQ3 324 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 KIFAP3Q92845 792 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 ZNF689Q96CS4 500 aaPredicted RBP20.59■□□□□ 0.89
PNKP-224ENST00000631020 TIGD1Q96MW7 591 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 COL4A3BPQ9Y5P4 624 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 ADGRA3Q8IWK6 1321 aa20.59■□□□□ 0.89
PNKP-224ENST00000631020 H3BNC9 293 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 DGKIO75912 1065 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 KRT18P05783 430 aaKnown RBP20.58■□□□□ 0.89
PNKP-224ENST00000631020 PRR29P0C7W0 189 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 CRYBB1P53674 252 aaPredicted RBP20.58■□□□□ 0.89
PNKP-224ENST00000631020 AMPD3Q01432 767 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 MXD4Q14582 209 aaPredicted RBP20.58■□□□□ 0.89
PNKP-224ENST00000631020 CNNM4Q6P4Q7 775 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 RTN4RL1Q86UN2 441 aaPredicted RBP20.58■□□□□ 0.89
PNKP-224ENST00000631020 NPAS4Q8IUM7 802 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 TMEM192Q8IY95 271 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 FIBCD1Q8N539 461 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
PNKP-224ENST00000631020 ODF2LQ9ULJ1 636 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 NCOR1O75376 2440 aa20.58■□□□□ 0.89
PNKP-224ENST00000631020 A0A087WZ62 844 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 C5orf67F2Z3F1 127 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 ASAP2O43150 1006 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 RPS6KA5O75582 802 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 RB1P06400 928 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 ZNF131P52739 623 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 CAPSQ13938 189 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.88
PNKP-224ENST00000631020 CLP1Q92989 425 aaKnown RBP20.58■□□□□ 0.88
PNKP-224ENST00000631020 DRC1Q96MC2 740 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 FDXACB1Q9BRP7 624 aaPredicted RBP20.58■□□□□ 0.88
PNKP-224ENST00000631020 LRRC27Q9C0I9 530 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 IFT122Q9HBG6 1241 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 ERVK-5Q9HDB9 667 aa20.58■□□□□ 0.88
PNKP-224ENST00000631020 MUC3AQ02505 3323 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 GPR182O15218 404 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 STAG3L1P0CL83 205 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 PTPROQ16827 1216 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 RNF149Q8NC42 400 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 TMEM40Q8WWA1 233 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 MRPL38Q96DV4 380 aaKnown RBP20.57■□□□□ 0.88
PNKP-224ENST00000631020 NLRP4Q96MN2 994 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 TMX1Q9H3N1 280 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 GINS2Q9Y248 185 aa20.57■□□□□ 0.88
PNKP-224ENST00000631020 KINO60870 393 aaKnown RBP20.56■□□□□ 0.88
PNKP-224ENST00000631020 LINC00271P0C7V0 271 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 PLS3P13797 630 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 PEX3P56589 373 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 CDC42EP1Q00587 391 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 KANK3Q6NY19 840 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 NLRP7Q8WX94 980 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 OSMRQ99650 979 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 C1orf112Q9NSG2 853 aa20.56■□□□□ 0.88
PNKP-224ENST00000631020 NOC2LQ9Y3T9 749 aaKnown RBP20.56■□□□□ 0.88
PNKP-224ENST00000631020 BRWD1Q9NSI6 2320 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 FRMD3A2A2Y4 597 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
PNKP-224ENST00000631020 FAM13AO94988 1023 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 IDEP14735 1019 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 NPTX2P47972 431 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 ASIC1P78348 528 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 DPYDQ12882 1025 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
PNKP-224ENST00000631020 POSTNQ15063 836 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 ZNF410Q86VK4 478 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 ELOA2Q8IYF1 753 aaPredicted RBP20.55■□□□□ 0.88
PNKP-224ENST00000631020 CMTR2Q8IYT2 770 aaKnown RBP20.55■□□□□ 0.88
PNKP-224ENST00000631020 MYCT1Q8N699 235 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 HLA-CQ95604 372 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 FIZ1Q96SL8 496 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 NTPCRQ9BSD7 190 aaKnown RBP20.55■□□□□ 0.88
PNKP-224ENST00000631020 ZHX3Q9H4I2 956 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 C17orf75Q9HAS0 396 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 PARVGQ9HBI0 331 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 PANK4Q9NVE7 773 aa20.55■□□□□ 0.88
PNKP-224ENST00000631020 KLRC4O43908 158 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 TBCAO75347 108 aaKnown RBP20.54■□□□□ 0.88
PNKP-224ENST00000631020 DEKP35659 375 aaKnown RBP20.54■□□□□ 0.88
PNKP-224ENST00000631020 BMPR1AP36894 532 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 NAMPTP43490 491 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 SARSP49591 514 aaKnown RBP20.54■□□□□ 0.88
PNKP-224ENST00000631020 PTENP60484 403 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 POU5F1BQ06416 359 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 GPM6BQ13491 265 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 PNOCQ13519 176 aa20.54■□□□□ 0.88
PNKP-224ENST00000631020 BTG3Q14201 252 aaPredicted RBP20.54■□□□□ 0.88
PNKP-224ENST00000631020 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms