RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 ITIH3Q06033 890 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 MXD4Q14582 209 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CALCRLQ16602 461 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 VPS52Q8N1B4 723 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 RPGRIP1Q96KN7 1286 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 TMEM175Q9BSA9 504 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 ANKEF1Q9NU02 776 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 ZBTB39O15060 712 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 INPPL1O15357 1258 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 DGAT1O75907 488 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 SLC11A1P49279 550 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 PTENP60484 403 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 BCL7CQ8WUZ0 217 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 NECTIN4Q96NY8 510 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 DZANK1Q9NVP4 752 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
SOX2-OT-247ENST00000628347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 TMEM221A6NGB7 291 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 M0R296 226 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 B4GALT3O60512 393 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 NEMFO60524 1076 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 JAK2O60674 1132 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 NEK4P51957 841 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 TFDP1Q14186 410 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
SOX2-OT-247ENST00000628347 WDFY4Q6ZS81 3184 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 WNT7AO00755 349 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 TSPAN1O60635 241 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 DDHD2O94830 711 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 ERLIN2O94905 339 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 ARL2P36404 184 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 MTHFRP42898 656 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 RARRES1P49788 294 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 SIGLEC14Q08ET2 396 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 TRIM29Q14134 588 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 AMHR2Q16671 573 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 SMG8Q8ND04 991 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 ZDBF2Q9HCK1 2354 aa13.87□□□□□ -0.19
SOX2-OT-247ENST00000628347 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 LILRB3O75022 631 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 ALDH2P05091 517 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 ITGA4P13612 1032 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 TXKP42681 527 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 MBTD1Q05BQ5 628 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 CAPSQ13938 189 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 KIAA1841Q6NSI8 718 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 ASAP3Q8TDY4 903 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 AUTS2Q8WXX7 1259 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 IPPQ9Y573 584 aa13.86□□□□□ -0.19
SOX2-OT-247ENST00000628347 NRP1O14786 923 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 EFEMP2O95967 443 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 SOD2P04179 222 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms