RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 FAM43BQ6ZT52 329 aaPredicted RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 BSNDQ8WZ55 320 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 TGS1Q96RS0 853 aaKnown RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 INO80BQ9C086 356 aaPredicted RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 C2orf40Q9H1Z8 148 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 PARVGQ9HBI0 331 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 CCDC169A6NNP5 214 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 MGEA5O60502 916 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 KINO60870 393 aaKnown RBP16.23■□□□□ 0.19
PNKP-221ENST00000627317 PLS3P13797 630 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 IDEP14735 1019 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 LIG1P18858 919 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
PNKP-221ENST00000627317 PTENP60484 403 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 ASIC1P78348 528 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 KRBA2Q6ZNG9 492 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 FAM228AQ86W67 206 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 GRAMD1CQ8IYS0 662 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 PAGE5Q96GU1 130 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 YME1L1Q96TA2 773 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 C17orf80Q9BSJ5 609 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 TRIM9Q9C026 710 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 IFT122Q9HBG6 1241 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 MYH11P35749 1972 aa16.23■□□□□ 0.19
PNKP-221ENST00000627317 SFI1A8K8P3 1242 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 INO80B-WBP1J3KQ70 363 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 GPR182O15218 404 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 CSDE1O75534 798 aaKnown RBP16.22■□□□□ 0.19
PNKP-221ENST00000627317 DGKIO75912 1065 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 UPP2O95045 317 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 GAP43P17677 238 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 IGFBP4P22692 258 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 NPTX2P47972 431 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 ZNF131P52739 623 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 SMTNP53814 917 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 NFX1Q12986 1120 aaKnown RBP16.22■□□□□ 0.19
PNKP-221ENST00000627317 DSC3Q14574 896 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 CATSPER4Q7RTX7 472 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 CCDC65Q8IXS2 484 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 GDPD5Q8WTR4 605 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 DNAJC19Q96DA6 116 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 KIFC3Q9BVG8 833 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 KMT5AQ9NQR1 393 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 KCNG1Q9UIX4 513 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 ST3GAL5Q9UNP4 418 aa16.22■□□□□ 0.19
PNKP-221ENST00000627317 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 TTC3P53804 2025 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 NR1I2O75469 434 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 ERLIN2O94905 339 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 FGFR4P22455 802 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 EFNA5P52803 228 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
PNKP-221ENST00000627317 CDCA2Q69YH5 1023 aaPredicted RBP16.21■□□□□ 0.19
PNKP-221ENST00000627317 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 IFNLR1Q8IU57 520 aaPredicted RBP16.21■□□□□ 0.19
PNKP-221ENST00000627317 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 ENGASEQ8NFI3 743 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 SPIRE2Q8WWL2 714 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 CLP1Q92989 425 aaKnown RBP16.21■□□□□ 0.19
PNKP-221ENST00000627317 C7orf25Q9BPX7 421 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 PANK4Q9NVE7 773 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 SEL1LQ9UBV2 794 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 HOOK1Q9UJC3 728 aaKnown RBP16.21■□□□□ 0.19
PNKP-221ENST00000627317 MTUS1Q9ULD2 1270 aa16.21■□□□□ 0.19
PNKP-221ENST00000627317 PHLPP2Q6ZVD8 1323 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 H0YCG3 227 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 K7ENM7 598 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 SLC16A4O15374 487 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 GTPBP6O43824 516 aaPredicted RBP16.2■□□□□ 0.18
PNKP-221ENST00000627317 MYL1P05976 194 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 CASP1P29466 404 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 MBTD1Q05BQ5 628 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 CUL4BQ13620 913 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 EPC2Q52LR7 807 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 CNNM4Q6P4Q7 775 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 FAM178BQ8IXR5 827 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 MINDY3Q9H8M7 445 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 RGS18Q9NS28 235 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 DACT1Q9NYF0 836 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 TTC28Q96AY4 2481 aa16.2■□□□□ 0.18
PNKP-221ENST00000627317 FRMD3A2A2Y4 597 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 C9IYK1 514 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 TRAK2O60296 914 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms