RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 E2F7Q96AV8 911 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 PDCD2LQ9BRP1 358 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 HAPLN2Q9GZV7 340 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 SLC12A8A0AV02 714 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 MTSS1O43312 755 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 IGSF3O75054 1194 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 DNAJC6O75061 913 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 HIP1RO75146 1068 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 CRTAMO95727 393 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 SRSF4Q08170 494 aaKnown RBP3.75□□□□□ -1.81
CHD2-203ENST00000625243 MPP3Q13368 585 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 SLFN12LQ6IEE8 588 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 ARHGEF25Q86VW2 580 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 MCF2L2Q86YR7 1114 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 ST13P5Q8NFI4 369 aaPredicted RBP3.75□□□□□ -1.81
CHD2-203ENST00000625243 HNRNPLLQ8WVV9 542 aaKnown RBP3.75□□□□□ -1.81
CHD2-203ENST00000625243 ZNF408Q9H9D4 720 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 HDAC5Q9UQL6 1122 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 CHST2Q9Y4C5 530 aa3.75□□□□□ -1.81
CHD2-203ENST00000625243 LEFTY2O00292 366 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 PRLP01236 227 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 FGRP09769 529 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 TP53BP2Q13625 1128 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 BMP8AQ7Z5Y6 402 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 PLXDC1Q8IUK5 500 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 SLC44A3Q8N4M1 653 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 PMFBP1Q8TBY8 1022 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 CDC6Q99741 560 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 TEX101Q9BY14 249 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 TRIM55Q9BYV6 548 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 COQ6Q9Y2Z9 468 aa3.74□□□□□ -1.81
CHD2-203ENST00000625243 SALL3Q9BXA9 1300 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 COL11A2P13942 1736 aaPredicted RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 TRBV23-1A0A0A0MS06 115 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 LRRC3CA6NJW4 275 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 CFBP00751 764 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 C6orf222P0C671 652 aaPredicted RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 DDX6P26196 483 aaKnown RBP eCLIP3.73□□□□□ -1.81
CHD2-203ENST00000625243 RNASE9P60153 205 aaKnown RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 SUMO1P63165 101 aaKnown RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 GABREP78334 506 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 NFE2L2Q16236 605 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 ANKS3Q6ZW76 656 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 ASB10Q8WXI3 467 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 MAML3Q96JK9 1138 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 DNAJC2Q99543 621 aaKnown RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 SPATA9Q9BWV2 254 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 LSM14BQ9BX40 385 aaKnown RBP3.73□□□□□ -1.81
CHD2-203ENST00000625243 SEMA4GQ9NTN9 838 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 SIRPGQ9P1W8 387 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 SYNPO2Q9UMS6 1093 aa3.73□□□□□ -1.81
CHD2-203ENST00000625243 WDR91A4D1P6 747 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 C1QL1O75973 258 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 EGR2P11161 476 aaPredicted RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 ZSCAN20P17040 1043 aaPredicted RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 IRF9Q00978 393 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 NHLH2Q02577 135 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 DDB1Q16531 1140 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 FAM209AQ5JX71 171 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 CC2D1AQ6P1N0 951 aaPredicted RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 OVCH1Q7RTY7 1134 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 NOP9Q86U38 636 aaKnown RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 SH2D3CQ8N5H7 860 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 OR5M3Q8NGP4 307 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 IPO9Q96P70 1041 aaKnown RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 UIMC1Q96RL1 719 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 CELF4Q9BZC1 486 aaKnown RBP3.72□□□□□ -1.81
CHD2-203ENST00000625243 ENKD1Q9H0I2 346 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 KMT5AQ9NQR1 393 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 ACSS2Q9NR19 701 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 ING3Q9NXR8 418 aa3.72□□□□□ -1.81
CHD2-203ENST00000625243 NRP1O14786 923 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 SPDEFO95238 335 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 HLA-DOAP06340 250 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 ITGAMP11215 1152 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 CASRP41180 1078 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 ZNF169Q14929 603 aaPredicted RBP3.71□□□□□ -1.82
CHD2-203ENST00000625243 ZNF425Q6IV72 752 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 MKL1Q969V6 931 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 MRFAP1L1Q96HT8 127 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 ADAM2Q99965 735 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 ZSWIM4Q9H7M6 989 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 RNF181Q9P0P0 153 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 ZNF70Q9UC06 446 aaPredicted RBP3.71□□□□□ -1.82
CHD2-203ENST00000625243 MAP3K2Q9Y2U5 619 aa3.71□□□□□ -1.82
CHD2-203ENST00000625243 MAST3O60307 1309 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 UBA6A0AVT1 1052 aaPredicted RBP3.7□□□□□ -1.82
CHD2-203ENST00000625243 CGB1A6NKQ9 187 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 PRR5-ARHGAP8B1AHC4 643 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 DIRC3C9JPN6 131 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 CLSTN1O94985 981 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 APPP05067 770 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 FNTBP49356 437 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 BCAR1P56945 870 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 SIM1P81133 766 aaPredicted RBP3.7□□□□□ -1.82
CHD2-203ENST00000625243 MRPL49Q13405 166 aaKnown RBP3.7□□□□□ -1.82
CHD2-203ENST00000625243 RAB33AQ14088 237 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 MAN2A1Q16706 1144 aa3.7□□□□□ -1.82
CHD2-203ENST00000625243 CCDC144BQ3MJ40 725 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms