RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 DUS1LQ6P1R4 473 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 HEATR3Q7Z4Q2 680 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 RSPH3Q86UC2 560 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ST13P4Q8IZP2 240 aaPredicted RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GIMAP8Q8ND71 665 aaPredicted RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DQX1Q8TE96 717 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 HPS3Q969F9 1004 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC42Q96M95 316 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 INPP4AQ96PE3 977 aaPredicted RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 NOX5Q96PH1 765 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 KBTBD4Q9NVX7 518 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 IRS2Q9Y4H2 1338 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC194A0A1B0GVG4 234 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC169A6NNP5 214 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF263O14978 683 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 STRNO43815 780 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RHOBTB3O94955 611 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ASMTLO95671 621 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 EYA4O95677 639 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CYP1A1P04798 512 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ALDH2P05091 517 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 LYNP07948 512 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SPATA31D3P0C874 917 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SRGNP10124 158 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 VDRP11473 427 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 FCER1AP12319 257 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RASA1P20936 1047 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CXCR5P32302 372 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RASSF2P50749 326 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 GEMIN4P57678 1058 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CYP27A1Q02318 531 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RASSF7Q02833 373 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 DHX9Q08211 1270 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CYLC2Q14093 348 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC6Q16204 474 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 DDB1Q16531 1140 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 MIIPQ5JXC2 388 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SPDYAQ5MJ70 313 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SPTY2D1Q68D10 685 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 C16orf87Q6PH81 154 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SPATA31D4Q6ZUB0 917 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SCUBE1Q8IWY4 988 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 FITM2Q8N6M3 262 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 USP38Q8NB14 1042 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SNX27Q96L92 541 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PRMT1Q99873 361 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PYM1Q9BRP8 204 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 METTL14Q9HCE5 456 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 FAIMQ9NVQ4 179 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PNMA3Q9UL41 463 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CD2APQ9Y5K6 639 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 MYH4Q9Y623 1939 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PASKQ96RG2 1323 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 EPHB6O15197 1021 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 HNRNPCL1O60812 293 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PLEKP08567 350 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 GM2AP17900 193 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 FUT4P22083 530 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SERPINB3P29508 390 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 HOXA10P31260 410 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 HIBADHP31937 336 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 STIP1P31948 543 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 RTP1P59025 263 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 AP1B1Q10567 949 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 STK4Q13043 487 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 TXNRD1Q16881 649 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 PDCD4Q53EL6 469 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 C12orf60Q5U649 245 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 OLFML2BQ68BL8 750 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ANKRD40Q6AI12 368 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 LRRC74BQ6ZQY2 392 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 INTS8Q75QN2 995 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 TAOK1Q7L7X3 1001 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SUPT20HQ8NEM7 779 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ABTB1Q969K4 478 aaPredicted RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 GRAMD1AQ96CP6 724 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 CNOT6LQ96LI5 555 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SIKE1Q9BRV8 207 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 TUBGCP2Q9BSJ2 902 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SH3GLB2Q9NR46 395 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 SRP68Q9UHB9 627 aaKnown RBP8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF652Q9Y2D9 606 aa8.04□□□□□ -1.12
TRIM49B-202ENST00000622138 TNRC6CQ9HCJ0 1690 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms