RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 NBR1Q14596 966 aa22.79■■□□□ 1.24
SMC6-210ENST00000621152 PCBP1Q15365 356 aaKnown RBP eCLIP22.79■■□□□ 1.24
SMC6-210ENST00000621152 IFNLR1Q8IU57 520 aaPredicted RBP22.79■■□□□ 1.24
SMC6-210ENST00000621152 C4orf32Q8N8J7 132 aa22.79■■□□□ 1.24
SMC6-210ENST00000621152 TMEM169Q96HH4 297 aa22.79■■□□□ 1.24
SMC6-210ENST00000621152 CPB2Q96IY4 423 aa22.79■■□□□ 1.24
SMC6-210ENST00000621152 GBP3Q9H0R5 595 aa22.79■■□□□ 1.24
SMC6-210ENST00000621152 POLR3FQ9H1D9 316 aaPredicted RBP22.79■■□□□ 1.24
SMC6-210ENST00000621152 UPF2Q9HAU5 1272 aaKnown RBP22.79■■□□□ 1.24
SMC6-210ENST00000621152 DBR1Q9UK59 544 aaKnown RBP22.79■■□□□ 1.24
SMC6-210ENST00000621152 C19orf67A6NJJ6 358 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 TSPAN1O60635 241 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 CXCL14O95715 111 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 GALTP07902 379 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 COL9A1P20849 921 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 U2AF2P26368 475 aaKnown RBP eCLIP22.78■■□□□ 1.246e-9■□□□□ 8.2
SMC6-210ENST00000621152 RPA1P27694 616 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 AXLP30530 894 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 MRPL43Q8N983 215 aaKnown RBP22.78■■□□□ 1.24
SMC6-210ENST00000621152 CNNM3Q8NE01 707 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 VN1R2Q8NFZ6 395 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 URGCPQ8TCY9 931 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 RSAD1Q9HA92 442 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 GPRC5CQ9NQ84 441 aa22.78■■□□□ 1.24
SMC6-210ENST00000621152 FSD2A1L4K1 749 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 ITGA4P13612 1032 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 NCLP19338 710 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 TOB1P50616 345 aaPredicted RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 AFF1P51825 1210 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 MBTD1Q05BQ5 628 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 SMC1AQ14683 1233 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 BMS1Q14692 1282 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 NOTUMQ6P988 496 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 POTEGQ6S5H5 508 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 ZNF280BQ86YH2 543 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 SMG8Q8ND04 991 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 FAM193BQ96PV7 902 aaPredicted RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 EIF2AQ9BY44 585 aaKnown RBP22.77■■□□□ 1.24
SMC6-210ENST00000621152 KANSL3Q9P2N6 904 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 DNAJB4Q9UDY4 337 aa22.77■■□□□ 1.24
SMC6-210ENST00000621152 CARNS1A5YM72 827 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 DDHD2O94830 711 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 ALDH2P05091 517 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 CA8P35219 290 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 LLGL2Q6P1M3 1020 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 TMEM184AQ6ZMB5 413 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 TMEM173Q86WV6 379 aaPredicted RBP22.76■■□□□ 1.23
SMC6-210ENST00000621152 VPS52Q8N1B4 723 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 SMRP1Q8NCR6 262 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 MCPH1Q8NEM0 835 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 IGSF21Q96ID5 467 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 TMX3Q96JJ7 454 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 NFKBIZQ9BYH8 718 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 CSRNP2Q9H175 543 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 RNF39Q9H2S5 420 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 UBN1Q9NPG3 1134 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 LRWD1Q9UFC0 647 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 KIF3AQ9Y496 699 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 IPPQ9Y573 584 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 CNTNAP2Q9UHC6 1331 aa22.76■■□□□ 1.23
SMC6-210ENST00000621152 NCOR1O75376 2440 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 ARHGEF35A5YM69 484 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 C2orf71A6NGG8 1288 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 LRRIQ4A6NIV6 560 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 POMCP01189 267 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 ARF4P18085 180 aaPredicted RBP22.75■■□□□ 1.23
SMC6-210ENST00000621152 CCT6AP40227 531 aaKnown RBP22.75■■□□□ 1.23
SMC6-210ENST00000621152 SLC11A1P49279 550 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 FXR2P51116 673 aaKnown RBP eCLIP22.75■■□□□ 1.231e-6■□□□□ 8.7
SMC6-210ENST00000621152 PTGDRQ13258 359 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 KCNC3Q14003 757 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 TMEM31Q5JXX7 168 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 MCTP1Q6DN14 999 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 PADI6Q6TGC4 694 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 DDX53Q86TM3 631 aaKnown RBP22.75■■□□□ 1.23
SMC6-210ENST00000621152 CCDC51Q96ER9 411 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 LRFN3Q9BTN0 628 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 PCDHB6Q9Y5E3 794 aa22.75■■□□□ 1.23
SMC6-210ENST00000621152 MUC3AQ02505 3323 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 SRGAP2BP0DMP2 458 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 ALADP13716 330 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 CYP11B2P19099 503 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 PDIA5Q14554 519 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 AMHR2Q16671 573 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 TMEM87AQ8NBN3 555 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 POP1Q99575 1024 aaKnown RBP22.74■■□□□ 1.23
SMC6-210ENST00000621152 FAN1Q9Y2M0 1017 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 USP15Q9Y4E8 981 aaPredicted RBP22.74■■□□□ 1.23
SMC6-210ENST00000621152 HES2Q9Y543 173 aa22.74■■□□□ 1.23
SMC6-210ENST00000621152 B4GALT5O43286 388 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 B4GALT3O60512 393 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 CD2BP2O95400 341 aaKnown RBP22.73■■□□□ 1.23
SMC6-210ENST00000621152 MUTP22033 750 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 ECM1Q16610 540 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 HAUS3Q68CZ6 603 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 ANKRD54Q6NXT1 300 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 CDR2LQ86X02 465 aaPredicted RBP22.73■■□□□ 1.23
SMC6-210ENST00000621152 BCL7CQ8WUZ0 217 aaPredicted RBP22.73■■□□□ 1.23
SMC6-210ENST00000621152 AUTS2Q8WXX7 1259 aa22.73■■□□□ 1.23
SMC6-210ENST00000621152 GAD1Q99259 594 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms