RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 INPP4AQ96PE3 977 aaPredicted RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 ACCSQ96QU6 501 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 SEPT11Q9NVA2 429 aaKnown RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 HOXC10Q9NYD6 342 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 HSPBP1Q9NZL4 362 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 CENPFP49454 3210 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 ANKRD63C9JTQ0 380 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 FDX1P10109 184 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 KCNA2P16389 499 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 ZNF526Q8TF50 670 aaPredicted RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 U2AF1L4Q8WU68 220 aaKnown RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 RIN2Q8WYP3 895 aaPredicted RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 MKNK1Q9BUB5 465 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 SEPT9Q9UHD8 586 aaPredicted RBP20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 ADAMTS5Q9UNA0 930 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 CAPN7Q9Y6W3 813 aa20.99■□□□□ 0.95
LAPTM4B-204ENST00000619747 KRT13P13646 458 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 NEDD9Q14511 834 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 NAB2Q15742 525 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 CCDC181Q5TID7 509 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 PHLDB3Q6NSJ2 640 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 CYFIP1Q7L576 1253 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 GLYCTKQ8IVS8 523 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 POP1Q99575 1024 aaKnown RBP20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 PAGR1Q9BTK6 254 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 INTS2Q9H0H0 1204 aaKnown RBP20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 LUC7LQ9NQ29 371 aaKnown RBP20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 DOCK1Q14185 1865 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 KIAA1217Q5T5P2 1943 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 SYF2O95926 243 aaKnown RBP20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 SFNP31947 248 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 NPTX2P47972 431 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 PLEKHO2Q8TD55 490 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 HDAC7Q8WUI4 952 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 C12orf42Q96LP6 360 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 JPH1Q9HDC5 661 aaPredicted RBP20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 SNCAIPQ9Y6H5 919 aa20.98■□□□□ 0.95
LAPTM4B-204ENST00000619747 STAT1P42224 750 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 JAM2P57087 298 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 SLC7A5Q01650 507 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 GADL1Q6ZQY3 521 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 CBWD2Q8IUF1 395 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 TMEM206Q9H813 350 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 DENND3A2RUS2 1198 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 LYPLA2O95372 231 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 VAMP7P51809 220 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 GPRASP2Q96D09 838 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 OTUD5Q96G74 571 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 CLMNQ96JQ2 1002 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 CABS1Q96KC9 395 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 CALR3Q96L12 384 aaKnown RBP20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 ACBD3Q9H3P7 528 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 F8VZ95 297 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 DDX3XO00571 662 aaKnown RBP eCLIP20.97■□□□□ 0.953e-11■■■■■ 40.6
LAPTM4B-204ENST00000619747 ACTR2P61160 394 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 CKAP4Q07065 602 aaKnown RBP20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 MTERF2Q49AM1 385 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 XXYLT1Q8NBI6 393 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 ELP3Q9H9T3 547 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 SLC9A2Q9UBY0 812 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 HYOU1Q9Y4L1 999 aa20.97■□□□□ 0.95
LAPTM4B-204ENST00000619747 RLFQ13129 1914 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 UBE4BO95155 1302 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 H0YHG0 523 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 ABCB4P21439 1286 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 ADSSP30520 456 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 FHDC1Q9C0D6 1143 aaPredicted RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 UBE2TQ9NPD8 197 aaPredicted RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 KMT5AQ9NQR1 393 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 BTBD7Q9P203 1132 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 GTPBP10A4D1E9 387 aaKnown RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 FOXN3O00409 490 aaPredicted RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 GTF2BQ00403 316 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 DMP1Q13316 513 aaPredicted RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 ZNF746Q6NUN9 644 aaPredicted RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 NCAPG2Q86XI2 1143 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 RNF10Q8N5U6 811 aaKnown RBP20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 KAT5Q92993 513 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 MCM8Q9UJA3 840 aa20.96■□□□□ 0.95
LAPTM4B-204ENST00000619747 POTEB2H3BUK9 544 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 ADRB2P07550 413 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 CNGA1P29973 690 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 SARNPP82979 210 aaKnown RBP20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 NFIL3Q16649 462 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 SULF1Q8IWU6 871 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 TMEM161BQ8NDZ6 487 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 SPATA4Q8NEY3 305 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 LRRC1Q9BTT6 524 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 ACP6Q9NPH0 428 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 APEX2Q9UBZ4 518 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 PHIPQ8WWQ0 1821 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 GRID2IPA4D2P6 1211 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 RDXP35241 583 aaKnown RBP20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 SOX5P35711 763 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 SMTNP53814 917 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 INHBEP58166 350 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 PRKCEQ02156 737 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 PALB2Q86YC2 1186 aa20.95■□□□□ 0.94
LAPTM4B-204ENST00000619747 TBX20Q9UMR3 447 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms