RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 APBB1IPQ7Z5R6 666 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 NYAP2Q9P242 653 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNF510Q9Y2H8 683 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 PDLIM1O00151 329 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 CALB2P22676 271 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 MTMR3Q13615 1198 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 PBKQ96KB5 322 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 TRAPPC9Q96Q05 1148 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 DMAP1Q9NPF5 467 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 CETN3O15182 167 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 INHBCP55103 352 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 USP46P62068 366 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 DEUP1Q05D60 604 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 EHHADHQ08426 723 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 RCN2Q14257 317 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 PLS1Q14651 629 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 CABP7Q86V35 215 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 ETNK1Q9HBU6 452 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 H7C1D1 291 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 SNX3O60493 162 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 PALMO75781 387 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 BPIFB4P59827 614 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 CALCRLQ16602 461 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 RASIP1Q5U651 963 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 MGARPQ8TDB4 240 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 NUDCD1Q96RS6 583 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 GMLQ99445 158 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 FGFR1OP2Q9NVK5 253 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 ATP8A1Q9Y2Q0 1164 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 F8VZ95 297 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 DAPK3O43293 454 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 PEX11AO75192 247 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 PLCG1P19174 1290 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 CD151P48509 253 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 CENPTQ96BT3 561 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 TLCD1Q96CP7 247 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 IFT43Q96FT9 208 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 IQCGQ9H095 443 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 DPH5Q9H2P9 285 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 USH1CQ9Y6N9 552 aa17.03■□□□□ 0.32
SEMA3B-214ENST00000619119 POTEMA6NI47 508 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 DALRD3Q5D0E6 543 aaKnown RBP17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 MKL1Q969V6 931 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 TUBGCP2Q9BSJ2 902 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 AP1M1Q9BXS5 423 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 TRIM31Q9BZY9 425 aa17.02■□□□□ 0.32
SEMA3B-214ENST00000619119 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 EDIL3O43854 480 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 MARCH6O60337 910 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 TPBGLP0DKB5 382 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 PSMC4P43686 418 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 PTDSS1P48651 473 aaKnown RBP17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 CUL1Q13616 776 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 CEP128Q6ZU80 1094 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 STK32AQ8WU08 396 aa17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 BZW2Q9Y6E2 419 aaKnown RBP17.02■□□□□ 0.31
SEMA3B-214ENST00000619119 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 ETS2P15036 469 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 ACADSP16219 412 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 CACNA2D1P54289 1103 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 MCL1Q07820 350 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 R3HDM1Q15032 1099 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 LRRC14Q15048 493 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 LAD1O00515 517 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 EGFRP00533 1210 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 TMC3Q7Z5M5 1100 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 SLX1AQ9BQ83 275 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 DDX47Q9H0S4 455 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 RNF14Q9UBS8 474 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 POLD1P28340 1107 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 ZNF658Q5TYW1 1059 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 FITM2Q8N6M3 262 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 UHMK1Q8TAS1 419 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 UTP4Q969X6 686 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 CARD9Q9H257 536 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms