RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TMEM174Q8WUU8 243 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 KIFAP3Q92845 792 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 SAAL1Q96ER3 474 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 NOX5Q96PH1 765 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 OSBPL9Q96SU4 736 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 NTPCRQ9BSD7 190 aaKnown RBP20.8■□□□□ 0.92
MMP28-204ENST00000615136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.8■□□□□ 0.92
MMP28-204ENST00000615136 PACSIN1Q9BY11 444 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 ZCCHC17Q9NP64 241 aaKnown RBP20.8■□□□□ 0.92
MMP28-204ENST00000615136 LUC7LQ9NQ29 371 aaKnown RBP20.8■□□□□ 0.92
MMP28-204ENST00000615136 RNF216Q9NWF9 866 aaPredicted RBP20.8■□□□□ 0.92
MMP28-204ENST00000615136 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.8■□□□□ 0.92
MMP28-204ENST00000615136 FBXL5Q9UKA1 691 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 USP20Q9Y2K6 914 aa20.8■□□□□ 0.92
MMP28-204ENST00000615136 MYL7Q01449 175 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 CBWD2Q8IUF1 395 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 LMO3Q8TAP4 145 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 COG1Q8WTW3 980 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 INTS2Q9H0H0 1204 aaKnown RBP20.79■□□□□ 0.92
MMP28-204ENST00000615136 POLR3FQ9H1D9 316 aaPredicted RBP20.79■□□□□ 0.92
MMP28-204ENST00000615136 SCN4AP35499 1836 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 EMSYQ7Z589 1322 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 MCM3APO60318 1980 aa20.79■□□□□ 0.92
MMP28-204ENST00000615136 IGKV6D-21A0A0A0MT36 114 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 DKC1O60832 514 aaKnown RBP eCLIP20.78■□□□□ 0.92
MMP28-204ENST00000615136 CNGA1P29973 690 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 VAMP7P51809 220 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 SMTNP53814 917 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 SPIRE2Q8WWL2 714 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 RUBCNQ92622 972 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 TMEM143Q96AN5 459 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 GPR88Q9GZN0 384 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 VIPAS39Q9H9C1 493 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 ATP6V0A4Q9HBG4 840 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 OATP04181 439 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 GCLMP48507 274 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 C2orf54Q08AI8 447 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 EMC2Q15006 297 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 CEP89Q96ST8 783 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 PORCNQ9H237 461 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 TSKSQ9UJT2 592 aa20.78■□□□□ 0.92
MMP28-204ENST00000615136 LRRIQ3A6PVS8 624 aaPredicted RBP20.77■□□□□ 0.92
MMP28-204ENST00000615136 GGPS1O95749 300 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 SLC25A27O95847 323 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 WDR78Q5VTH9 848 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 PHLDB3Q6NSJ2 640 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 NFRKBQ6P4R8 1299 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 INTS8Q75QN2 995 aaKnown RBP20.77■□□□□ 0.92
MMP28-204ENST00000615136 FASTKD5Q7L8L6 764 aaKnown RBP20.77■□□□□ 0.92
MMP28-204ENST00000615136 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 OLIG1Q8TAK6 271 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 TLR10Q9BXR5 811 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 DNAJC12Q9UKB3 198 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 CLEC11AQ9Y240 323 aa20.77■□□□□ 0.92
MMP28-204ENST00000615136 DNAJC25-GNG10A0A024R161 153 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 BUB1O43683 1085 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 GFPT2O94808 682 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 KRT13P13646 458 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 OSBPP22059 807 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 MKRN3Q13064 507 aaKnown RBP20.77■□□□□ 0.91
MMP28-204ENST00000615136 ACBD3Q9H3P7 528 aa20.77■□□□□ 0.91
MMP28-204ENST00000615136 ZNFX1Q9P2E3 1918 aaKnown RBP20.76■□□□□ 0.91
MMP28-204ENST00000615136 PRKCIP41743 596 aa20.76■□□□□ 0.91
MMP28-204ENST00000615136 POLGP54098 1239 aaPredicted RBP20.76■□□□□ 0.91
MMP28-204ENST00000615136 NAB2Q15742 525 aa20.76■□□□□ 0.91
MMP28-204ENST00000615136 ASAP3Q8TDY4 903 aa20.76■□□□□ 0.91
MMP28-204ENST00000615136 EFCC1Q9HA90 598 aa20.76■□□□□ 0.91
MMP28-204ENST00000615136 F8VZ95 297 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 TULP1O00294 542 aaPredicted RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 KLRC1P26715 233 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 DRAP1Q14919 205 aaPredicted RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 SNRNP35Q16560 246 aaKnown RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 SLC17A8Q8NDX2 589 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 SPATA4Q8NEY3 305 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 SLC10A4Q96EP9 437 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 MMP19Q99542 508 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 POP1Q99575 1024 aaKnown RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 DHX33Q9H6R0 707 aaKnown RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 C17orf75Q9HAS0 396 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.75■□□□□ 0.91
MMP28-204ENST00000615136 ARHGAP28Q9P2N2 729 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 APEX2Q9UBZ4 518 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 IQCA1LA6NCM1 817 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 TCF7P36402 384 aaPredicted RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 SNAPC2Q13487 334 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 CCDC70Q6NSX1 233 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 FBXO16Q8IX29 292 aaPredicted RBP20.75■□□□□ 0.91
MMP28-204ENST00000615136 FAM84AQ96KN4 292 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 EXOC7Q9UPT5 735 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 PCDHGC5Q9Y5F6 944 aa20.75■□□□□ 0.91
MMP28-204ENST00000615136 BTNL10A8MVZ5 291 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 EVI5O60447 810 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 AARSP49588 968 aaKnown RBP eCLIP20.74■□□□□ 0.91
MMP28-204ENST00000615136 RTP1P59025 263 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 KCTD2Q14681 263 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 HSDL1Q3SXM5 330 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 EPC2Q52LR7 807 aa20.74■□□□□ 0.91
MMP28-204ENST00000615136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms