RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TXLNGQ9NUQ3 528 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 MRC1P22897 1456 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 GNAT1P11488 350 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 CPA2P48052 419 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 XRCC4Q13426 336 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 INTS2Q9H0H0 1204 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 CDC42EP4Q9H3Q1 356 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
CDH5-208ENST00000614547 NFAT5O94916 1531 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
CDH5-208ENST00000614547 DNAJC8O75937 253 aaPredicted RBP12.62□□□□□ -0.39
CDH5-208ENST00000614547 MAPK4P31152 587 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 DYNLT1P63172 113 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 STRN3Q13033 797 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 LRRC36Q1X8D7 754 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 SLC35G1Q2M3R5 365 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 SLC30A9Q6PML9 568 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 PRUNE1Q86TP1 453 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 PPP1R14CQ8TAE6 165 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
CDH5-208ENST00000614547 RUSC1Q9BVN2 902 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 LRRC37A3O60309 1634 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 PODXLO00592 558 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 CALCAP01258 141 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 CHRNA3P32297 505 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 ALG3Q92685 438 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
CDH5-208ENST00000614547 NPHS2Q9NP85 383 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 ANAPC7Q9UJX3 599 aa12.62□□□□□ -0.39
CDH5-208ENST00000614547 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 CYP26A1O43174 497 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 OPHN1O60890 802 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 PHF2O75151 1096 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 CBX6O95503 412 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 RANBP1P43487 201 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 NCALDP61601 193 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 CFAP157Q5JU67 520 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 SYN2Q92777 582 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 SH3GL3Q99963 347 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 LTN1O94822 1766 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 ZBTB39O15060 712 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 SNX3O60493 162 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 NTSR2O95665 410 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 C6orf163Q5TEZ5 329 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 GBP7Q8N8V2 638 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 GAS7O60861 476 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 GDF11O95390 407 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 RWDD2BP57060 319 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 GPC5P78333 572 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 PALB2Q86YC2 1186 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 TEKT4Q8WW24 435 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDH5-208ENST00000614547 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
CDH5-208ENST00000614547 MYH2Q9UKX2 1941 aa12.61□□□□□ -0.39
CDH5-208ENST00000614547 TCRBV7S2A1N4TA0A589 114 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 MAPK13O15264 365 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 PLS3P13797 630 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 PDIA5Q14554 519 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CCDC62Q6P9F0 684 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CTAGE3PQ8IX95 158 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 DNAJC19Q96DA6 116 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 GANQ9H2C0 597 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 AJAP1Q9UKB5 411 aaPredicted RBP12.6□□□□□ -0.39
CDH5-208ENST00000614547 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CRYBG1Q9Y4K1 1723 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ATP2A1O14983 1001 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH5-208ENST00000614547 PTENP60484 403 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 DHX34Q14147 1143 aaKnown RBP12.6□□□□□ -0.39
CDH5-208ENST00000614547 NFIXQ14938 502 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms