RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 DHX33Q9H6R0 707 aaKnown RBP18.73■□□□□ 0.59
TVP23A-210ENST00000612195 MINDY3Q9H8M7 445 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 CCDC194A0A1B0GVG4 234 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 H0Y858 1186 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
TVP23A-210ENST00000612195 SSBP05455 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
TVP23A-210ENST00000612195 P4HBP07237 508 aaKnown RBP18.72■□□□□ 0.59
TVP23A-210ENST00000612195 HOXA11P31270 313 aaPredicted RBP18.72■□□□□ 0.59
TVP23A-210ENST00000612195 LAMTOR4Q0VGL1 99 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 SRGAP1Q7Z6B7 1085 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 NEK8Q86SG6 692 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 ZDHHC14Q8IZN3 488 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 RSAD1Q9HA92 442 aa18.72■□□□□ 0.59
TVP23A-210ENST00000612195 BMP2KQ9NSY1 1161 aaPredicted RBP18.72■□□□□ 0.59
TVP23A-210ENST00000612195 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.59
TVP23A-210ENST00000612195 DTNBO60941 627 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 ALDH2P05091 517 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 UBXN11Q5T124 520 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 PPFIBP1Q86W92 1011 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 PLCD3Q8N3E9 789 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
TVP23A-210ENST00000612195 HAS1Q92839 578 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 KLHL5Q96PQ7 755 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 IRF2BPLQ9H1B7 796 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 GJB4Q9NTQ9 266 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 PDRG1Q9NUG6 133 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 USTQ9Y2C2 406 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 PPME1Q9Y570 386 aa18.71■□□□□ 0.59
TVP23A-210ENST00000612195 GALR2O43603 387 aaPredicted RBP18.7■□□□□ 0.58
TVP23A-210ENST00000612195 ST18O60284 1047 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 CCNT1O60563 726 aaKnown RBP18.7■□□□□ 0.58
TVP23A-210ENST00000612195 LILRB3O75022 631 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 POMCP01189 267 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 CNPP09543 421 aaKnown RBP18.7■□□□□ 0.58
TVP23A-210ENST00000612195 KLRC2P26717 231 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 YWHABP31946 246 aaKnown RBP18.7■□□□□ 0.58
TVP23A-210ENST00000612195 RFC5P40937 340 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 NUBP1P53384 320 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 EPHA7Q15375 998 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 GPR149Q86SP6 731 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 TMEM105Q8N8V8 129 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 OXER1Q8TDS5 423 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 FAM193BQ96PV7 902 aaPredicted RBP18.7■□□□□ 0.58
TVP23A-210ENST00000612195 LXNQ9BS40 222 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 EMILIN2Q9BXX0 1053 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 RGL1Q9NZL6 768 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 KANSL3Q9P2N6 904 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 FAN1Q9Y2M0 1017 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
TVP23A-210ENST00000612195 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 NRP1O14786 923 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 ZBTB39O15060 712 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 MARCH6O60337 910 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 GFRA3O60609 400 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
TVP23A-210ENST00000612195 CLCN4P51793 760 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 SCRN1Q12765 414 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 EMC2Q15006 297 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 FERMT3Q86UX7 667 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 C4orf19Q8IY42 314 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 RNF149Q8NC42 400 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 DYDC2Q96IM9 177 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 TMEM175Q9BSA9 504 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 SFXN1Q9H9B4 322 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 STK39Q9UEW8 545 aa18.69■□□□□ 0.58
TVP23A-210ENST00000612195 SPTBN4Q9H254 2564 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 TBX3O15119 743 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 CDKL5O76039 1030 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 CYP4A11Q02928 519 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 CTTNQ14247 550 aaKnown RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 XKR9Q5GH70 373 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 EARS2Q5JPH6 523 aaKnown RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 NCAPH2Q6IBW4 605 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 OTUD6AQ7L8S5 288 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 SMG8Q8ND04 991 aaKnown RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 TCP11Q8WWU5 503 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 ACSF2Q96CM8 615 aaPredicted RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 MRPL17Q9NRX2 175 aaKnown RBP18.68■□□□□ 0.58
TVP23A-210ENST00000612195 C2orf16Q68DN1 1984 aa18.68■□□□□ 0.58
TVP23A-210ENST00000612195 RIF1Q5UIP0 2472 aaKnown RBP18.67■□□□□ 0.58
TVP23A-210ENST00000612195 PTPRZ1P23471 2315 aaPredicted RBP18.67■□□□□ 0.58
TVP23A-210ENST00000612195 C2CD2LO14523 706 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 ASAP2O43150 1006 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 GAS2O43903 313 aaKnown RBP18.67■□□□□ 0.58
TVP23A-210ENST00000612195 ITGA4P13612 1032 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 XBP1P17861 261 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 ASTLQ6HA08 431 aaPredicted RBP18.67■□□□□ 0.58
TVP23A-210ENST00000612195 OTOP3Q7RTS5 596 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 TAS1R1Q7RTX1 841 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 EIF2AQ9BY44 585 aaKnown RBP18.67■□□□□ 0.58
TVP23A-210ENST00000612195 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
TVP23A-210ENST00000612195 MFSD1Q9H3U5 465 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms