RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ZFPM1Q8IX07 1006 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 FIZ1Q96SL8 496 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCDC134Q9H6E4 229 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CHMP2AO43633 222 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CTNNA2P26232 953 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 MESDQ14696 234 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 TNFAIP8L3Q5GJ75 292 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 POP1Q99575 1024 aaKnown RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 SNX3O60493 162 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 PYGMP11217 842 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 COMTP21964 271 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 SREBF1P36956 1147 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 CLNS1AP54105 237 aaKnown RBP16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 KIF22Q14807 665 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 LONRF1Q17RB8 773 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 SLFN13Q68D06 897 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 EXOC3L1Q86VI1 746 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 BTBD6Q96KE9 485 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 MLXIPLQ9NP71 852 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 MTRF1LQ9UGC7 380 aaKnown RBP16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 GAP43P17677 238 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 RHOT2Q8IXI1 618 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 UBL4BQ8N7F7 174 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 LMO3Q8TAP4 145 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
PCDHGB1-202ENST00000611598 PFASO15067 1338 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 ALAS1P13196 640 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 MMP14P50281 582 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 PEX5P50542 639 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 NCALDP61601 193 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 DLG4P78352 724 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 C11orf63Q6NUN7 778 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 ARHGEF19Q8IW93 802 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCDC105Q8IYK2 499 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 DYDC2Q96IM9 177 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 PODXLO00592 558 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 OAS1P00973 400 aaKnown RBP16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 RARAP10276 462 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 GBP2P32456 591 aaPredicted RBP16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 MKNK1Q9BUB5 465 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 TMEM109Q9BVC6 243 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 ACP6Q9NPH0 428 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
PCDHGB1-202ENST00000611598 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 MIF4GDA9UHW6 222 aaKnown RBP16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 SLITRK3O94933 977 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 ACSL3O95573 720 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 RARGP13631 454 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 CACNB3P54284 484 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 AGAP11Q8TF27 550 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 PRCCQ92733 491 aaPredicted RBP16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 KAT5Q92993 513 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 ART4Q93070 314 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 THOC1Q96FV9 657 aaKnown RBP16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.2
PCDHGB1-202ENST00000611598 ADAMTSL1Q8N6G6 1762 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 ZNF76P36508 570 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 COILP38432 576 aaPredicted RBP16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 HADHBP55084 474 aaKnown RBP16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 BFSP1Q12934 665 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 BTNL9Q6UXG8 535 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 HS2ST1Q7LGA3 356 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 FAM178BQ8IXR5 827 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 DYDC1Q8WWB3 177 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.19
PCDHGB1-202ENST00000611598 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms