RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 RASAL2Q9UJF2 1139 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 ATAD5Q96QE3 1844 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 BAZ2BQ9UIF8 2168 aaKnown RBP12.85□□□□□ -0.35
TP53-220ENST00000610623 MYMKA6NI61 221 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
TP53-220ENST00000610623 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 RAD23BP54727 409 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 PLTPP55058 493 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 ADAM9Q13443 819 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 CUL3Q13618 768 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 AUHQ13825 339 aaKnown RBP12.85□□□□□ -0.35
TP53-220ENST00000610623 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 IRF2BP2Q7Z5L9 587 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
TP53-220ENST00000610623 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 TRAPPC9Q96Q05 1148 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 EPAS1Q99814 870 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 TRIM4Q9C037 500 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 GANQ9H2C0 597 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 ETNK1Q9HBU6 452 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.85□□□□□ -0.35
TP53-220ENST00000610623 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
TP53-220ENST00000610623 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
TP53-220ENST00000610623 AMFRQ9UKV5 643 aa12.85□□□□□ -0.35
TP53-220ENST00000610623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
TP53-220ENST00000610623 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 GSTA2P09210 222 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 GNAQP50148 359 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 TMEM154Q6P9G4 183 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 B4GALNT2Q8NHY0 566 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 TMEM237Q96Q45 408 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 MMTAG2Q9BU76 263 aaKnown RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.84□□□□□ -0.35
TP53-220ENST00000610623 RPL26L1Q9UNX3 145 aaKnown RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 TRAF5O00463 557 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 PLSCR1O15162 318 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 PEX11AO75192 247 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 ATP5DP30049 168 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 PRKCIP41743 596 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 BTDP43251 543 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 TFAP4Q01664 338 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 ZDHHC24Q6UX98 284 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 FBXO25Q8TCJ0 367 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 CKAP2Q8WWK9 683 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
TP53-220ENST00000610623 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
TP53-220ENST00000610623 LRMDAQ9H2I8 198 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
TP53-220ENST00000610623 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.35
TP53-220ENST00000610623 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.35
TP53-220ENST00000610623 GAKO14976 1311 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 PDLIM1O00151 329 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 EVX2Q03828 476 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 GRIK5Q16478 980 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 WASHC2DQ5SRD0 308 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 FAM81AQ8TBF8 368 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 EPS8L3Q8TE67 593 aaKnown RBP12.83□□□□□ -0.36
TP53-220ENST00000610623 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 DNAJC9Q8WXX5 260 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 INPP5DQ92835 1189 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 UTP4Q969X6 686 aaKnown RBP12.83□□□□□ -0.36
TP53-220ENST00000610623 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 CARD9Q9H257 536 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 SEMA4AQ9H3S1 761 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 POLLQ9UGP5 575 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 NENFQ9UMX5 172 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 TRIM33Q9UPN9 1127 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 TTC36A6NLP5 189 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 C6orf229H3BNL8 230 aa12.83□□□□□ -0.36
TP53-220ENST00000610623 PODXLO00592 558 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms