RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FAM205CA6NFA0 338 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 ASAP2O43150 1006 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 B4GALT3O60512 393 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 ALDH2P05091 517 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 EPCAMP16422 314 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 MTHFRP42898 656 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 GIT2Q14161 759 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 TCP11Q8WWU5 503 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 RIPOR3Q96MK2 946 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 NECTIN4Q96NY8 510 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 VN1R3Q9BXE9 311 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 RSAD1Q9HA92 442 aa14.95□□□□□ -0.02
POLR2J3-219ENST00000608621 ZDBF2Q9HCK1 2354 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 SLITRK3O94933 977 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 FDPSP14324 419 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 SPIRE1Q08AE8 756 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 NR5A1Q13285 461 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 ATAT1Q5SQI0 421 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 TPH2Q8IWU9 490 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 RNF149Q8NC42 400 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 KREMEN2Q8NCW0 462 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 FAM193BQ96PV7 902 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 KANSL3Q9P2N6 904 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 FAN1Q9Y2M0 1017 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 WDFY4Q6ZS81 3184 aa14.94□□□□□ -0.02
POLR2J3-219ENST00000608621 NRP1O14786 923 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 POMCP01189 267 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 AVPR2P30518 371 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 KRT2P35908 639 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 AK2P54819 239 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 PTPN5P54829 565 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 EMC2Q15006 297 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 WASF1Q92558 559 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 KLHL5Q96PQ7 755 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 PHOX2BQ99453 314 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 MTRQ99707 1265 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 PRRX2Q99811 253 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 DZANK1Q9NVP4 752 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 PCDHA12Q9UN75 941 aa14.93□□□□□ -0.02
POLR2J3-219ENST00000608621 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 PDGFBP01127 241 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 SSBP05455 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 ITGA4P13612 1032 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 KLRC2P26717 231 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 TCF15Q12870 199 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 PTPN14Q15678 1187 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 TMC5Q6UXY8 1006 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 CABP7Q86V35 215 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 PPFIBP1Q86W92 1011 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 XPNPEP1Q9NQW7 623 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 LIMD1Q9UGP4 676 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 SORCS3Q9UPU3 1222 aa14.92□□□□□ -0.02
POLR2J3-219ENST00000608621 LILRB3O75022 631 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 ERLIN2O94905 339 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 BRD1O95696 1058 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 CNPP09543 421 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 ANAPC15P60006 121 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 PTENP60484 403 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 MXD4Q14582 209 aaPredicted RBP14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 ME3Q16798 604 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 HSD17B14Q9BPX1 270 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 EIF2AQ9BY44 585 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 UBN1Q9NPG3 1134 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 MIOSQ9NXC5 875 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 STK39Q9UEW8 545 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 IPPQ9Y573 584 aa14.91□□□□□ -0.02
POLR2J3-219ENST00000608621 A0A087WWV3 80 aa14.9□□□□□ -0.02
POLR2J3-219ENST00000608621 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
POLR2J3-219ENST00000608621 BTBD18B2RXH4 712 aa14.9□□□□□ -0.02
POLR2J3-219ENST00000608621 INO80B-WBP1J3KQ70 363 aa14.9□□□□□ -0.02
POLR2J3-219ENST00000608621 TSPAN1O60635 241 aa14.9□□□□□ -0.02
POLR2J3-219ENST00000608621 LYPLA2O95372 231 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms