RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 NACC1Q96RE7 527 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 EIF2AQ9BY44 585 aaKnown RBP18.19■□□□□ 0.5
TUBE1-206ENST00000603722 NRDE2Q9H7Z3 1164 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 RSAD1Q9HA92 442 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
TUBE1-206ENST00000603722 DBR1Q9UK59 544 aaKnown RBP18.19■□□□□ 0.5
TUBE1-206ENST00000603722 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 ATG2AQ2TAZ0 1938 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 FSD2A1L4K1 749 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 CD2BP2O95400 341 aaKnown RBP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 EYA4O95677 639 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 RPA1P27694 616 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 CA8P35219 290 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 AFF1P51825 1210 aaKnown RBP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 COASYQ13057 564 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 PCBP1Q15365 356 aaKnown RBP eCLIP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 AMHR2Q16671 573 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 HAUS3Q68CZ6 603 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 NOTUMQ6P988 496 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 MRPL10Q7Z7H8 261 aaKnown RBP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
TUBE1-206ENST00000603722 SMRP1Q8NCR6 262 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 CCDC51Q96ER9 411 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 TMX3Q96JJ7 454 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 DNAJB4Q9UDY4 337 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 CNTNAP2Q9UHC6 1331 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 BDP1A6H8Y1 2624 aa18.18■□□□□ 0.5
TUBE1-206ENST00000603722 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 ARHGEF35A5YM69 484 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 LRRIQ4A6NIV6 560 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 B4GALT3O60512 393 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 GALTP07902 379 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 NCLP19338 710 aaKnown RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 AXLP30530 894 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 POU5F1BQ06416 359 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 LLGL2Q6P1M3 1020 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 ZNF280BQ86YH2 543 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 C4orf32Q8N8J7 132 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 SMG8Q8ND04 991 aaKnown RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 MCPH1Q8NEM0 835 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 BCL7CQ8WUZ0 217 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-206ENST00000603722 NFKBIZQ9BYH8 718 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 IPPQ9Y573 584 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 PCDHB6Q9Y5E3 794 aa18.17■□□□□ 0.5
TUBE1-206ENST00000603722 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 B4GALT5O43286 388 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 POMCP01189 267 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 SRGAP2BP0DMP2 458 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 ITGA4P13612 1032 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 ARF4P18085 180 aaPredicted RBP18.16■□□□□ 0.5
TUBE1-206ENST00000603722 COL9A1P20849 921 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 CCT6AP40227 531 aaKnown RBP18.16■□□□□ 0.5
TUBE1-206ENST00000603722 SLC11A1P49279 550 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 ECM1Q16610 540 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 IGSF21Q96ID5 467 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 POP1Q99575 1024 aaKnown RBP18.16■□□□□ 0.5
TUBE1-206ENST00000603722 TRIM6Q9C030 488 aaPredicted RBP18.16■□□□□ 0.5
TUBE1-206ENST00000603722 CSRNP2Q9H175 543 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 LRWD1Q9UFC0 647 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 USP15Q9Y4E8 981 aaPredicted RBP18.16■□□□□ 0.5
TUBE1-206ENST00000603722 HES2Q9Y543 173 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
TUBE1-206ENST00000603722 CARNS1A5YM72 827 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 FAM86C2PA6NEL3 165 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 DDHD2O94830 711 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 MLH1P40692 756 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 PTGDRQ13258 359 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 KCNC3Q14003 757 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 MCTP1Q6DN14 999 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 PADI6Q6TGC4 694 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 CDR2LQ86X02 465 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-206ENST00000603722 VPS52Q8N1B4 723 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 MRPL43Q8N983 215 aaKnown RBP18.15■□□□□ 0.5
TUBE1-206ENST00000603722 AUTS2Q8WXX7 1259 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 APOL6Q9BWW8 343 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 ZBP1Q9H171 429 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 UBN1Q9NPG3 1134 aa18.15■□□□□ 0.5
TUBE1-206ENST00000603722 BRWD1Q9NSI6 2320 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.14■□□□□ 0.49
TUBE1-206ENST00000603722 GJB2P29033 226 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 BMS1Q14692 1282 aaKnown RBP18.14■□□□□ 0.49
TUBE1-206ENST00000603722 TMEM31Q5JXX7 168 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 CDCA2Q69YH5 1023 aaPredicted RBP18.14■□□□□ 0.49
TUBE1-206ENST00000603722 ZBTB8OSQ8IWT0 167 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 SNX29Q8TEQ0 813 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 BSNDQ8WZ55 320 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 TBC1D32Q96NH3 1257 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
TUBE1-206ENST00000603722 GAD1Q99259 594 aa18.14■□□□□ 0.49
TUBE1-206ENST00000603722 NXF3Q9H4D5 531 aaKnown RBP18.14■□□□□ 0.49
TUBE1-206ENST00000603722 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms