RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 Q4G0T1 1027 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 STXBP5Q5T5C0 1151 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 RNF168Q8IYW5 571 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 NUP93Q8N1F7 819 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 CPA6Q8N4T0 437 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 USP38Q8NB14 1042 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SGCDQ92629 289 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 YME1L1Q96TA2 773 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 BRD8Q9H0E9 1235 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ABCB6Q9NP58 842 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 AKAP7Q9P0M2 348 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ZC3H7BQ9UGR2 993 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 MAPRE3Q9UPY8 281 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF510Q9Y2H8 683 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 WASF2Q9Y6W5 498 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC171Q6TFL3 1326 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 MAP3K5Q99683 1374 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 A0A087WZG4 1122 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 A0A0G2JS52 829 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 B4E171 279 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 AP3B1O00203 1094 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 AP1G1O43747 822 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 POLR3DP05423 398 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 TOP1P11387 765 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SFTPCP11686 197 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 FERP16591 822 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ADSLP30566 484 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 TGFB2P61812 414 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SLFN5Q08AF3 891 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 MAP3K12Q12852 859 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 TRIM28Q13263 835 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 PEX5LQ8IYB4 626 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 LINC00469Q8N7U9 141 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SCG3Q8WXD2 468 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 FATE1Q969F0 183 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 C16orf45Q96MC5 204 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 PIGSQ96S52 555 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 RUFY1Q96T51 708 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ACO2Q99798 780 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ADPGKQ9BRR6 497 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 KRT82Q9NSB4 513 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 PCDHGC5Q9Y5F6 944 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC4A4Q9Y6R1 1079 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 MSH6P52701 1360 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TMEM221A6NGB7 291 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PHF20L1A8MW92 1017 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CACNB4O00305 520 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PLOD2O00469 737 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CASQ2O14958 399 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 GDF9O60383 454 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 FBXO21O94952 628 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 KCNH1O95259 989 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PRLRP16471 622 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TM4SF4P48230 202 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CLCN2P51788 898 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PPFIA1Q13136 1202 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 COX20Q5RI15 118 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TTLL7Q6ZT98 887 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TAOK1Q7L7X3 1001 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 BRAPQ7Z569 592 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 LMBR1Q8WVP7 490 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CUL5Q93034 780 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TTC17Q96AE7 1141 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 INSM2Q96T92 566 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CORO1BQ9BR76 489 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ESYT1Q9BSJ8 1104 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PARD6BQ9BYG5 372 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 EDEM3Q9BZQ6 932 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 VPS37BQ9H9H4 285 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 STRN4Q9NRL3 753 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 HAUS2Q9NVX0 235 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 NRAPQ86VF7 1730 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 THSD7AQ9UPZ6 1657 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CASKIN1Q8WXD9 1431 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 A6NLC8 198 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 MEN1O00255 615 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ST8SIA5O15466 376 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PQBP1O60828 265 aaKnown RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 RNF8O76064 485 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PRKD3O94806 890 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PAPLNO95428 1278 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PDHA1P08559 390 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TRIM21P19474 475 aaKnown RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 USP11P51784 963 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 NR1H2P55055 460 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CD83Q01151 205 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SEZ6Q53EL9 994 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TMEM67Q5HYA8 995 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 C16orf46Q6P387 395 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PDZD4Q76G19 769 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SPATS2Q86XZ4 545 aaKnown RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 LRRC49Q8IUZ0 686 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TRMT44Q8IYL2 757 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms