RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 DHX58Q96C10 678 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
SNRPA-209ENST00000601253 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
SNRPA-209ENST00000601253 TTC3P53804 2025 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 PTPRSQ13332 1948 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 FAM237AA0A1B0GTK4 181 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 MYMKA6NI61 221 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 K7ERI5 159 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 POLR2DO15514 142 aaKnown RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 DDX12PQ92771 950 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 ZNF689Q96CS4 500 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-209ENST00000601253 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 HPSEQ9Y251 543 aa15.22■□□□□ 0.03
SNRPA-209ENST00000601253 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 LINC01553A4QN01 128 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 B4GALT5O43286 388 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 PFKFB1P16118 471 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 GAP43P17677 238 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 NCKAP1LP55160 1127 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 TAP1Q03518 808 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 CSPP1Q1MSJ5 1256 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 UBXN11Q5T124 520 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 CNNM4Q6P4Q7 775 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 MYCT1Q8N699 235 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 TMEM161BQ8NDZ6 487 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
SNRPA-209ENST00000601253 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
SNRPA-209ENST00000601253 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 ZNF576Q9H609 170 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 SEL1LQ9UBV2 794 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
SNRPA-209ENST00000601253 LAMA2P24043 3122 aaKnown RBP15.21■□□□□ 0.02
SNRPA-209ENST00000601253 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 N4BP3O15049 544 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 SLC16A4O15374 487 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 TRAK2O60296 914 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 SLFN14P0C7P3 912 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 MAPTP10636 758 aaKnown RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 STRN3Q13033 797 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 BTG3Q14201 252 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 MRPL10Q7Z7H8 261 aaKnown RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 CEP57L1Q8IYX8 460 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 DNAJC19Q96DA6 116 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 CPB2Q96IY4 423 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 MRPL4Q9BYD3 311 aaKnown RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-209ENST00000601253 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 ST6GALNAC4Q9H4F1 302 aa15.2■□□□□ 0.02
SNRPA-209ENST00000601253 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 FRMD3A2A2Y4 597 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 FGFR1P11362 822 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 LIG1P18858 919 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
SNRPA-209ENST00000601253 SYKP43405 635 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 HAUS6Q7Z4H7 955 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 ABI1Q8IZP0 508 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 RNF169Q8NCN4 708 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
SNRPA-209ENST00000601253 C7orf25Q9BPX7 421 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 ADPGKQ9BRR6 497 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 TRIM9Q9C026 710 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
SNRPA-209ENST00000601253 PDZD7Q9H5P4 517 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
SNRPA-209ENST00000601253 TBKBP1A7MCY6 615 aa15.18■□□□□ 0.02
SNRPA-209ENST00000601253 K7ENM7 598 aa15.18■□□□□ 0.02
SNRPA-209ENST00000601253 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms