RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TMC5Q6UXY8 1006 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 AGMOQ6ZNB7 445 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 TRIM22Q8IYM9 498 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 CCDC148Q8NFR7 591 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 ATOH1Q92858 354 aaPredicted RBP15.32■□□□□ 0.04
IRF3-225ENST00000600022 TMEM169Q96HH4 297 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 NLRP4Q96MN2 994 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 ANP32EQ9BTT0 268 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 CHST12Q9NRB3 414 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
IRF3-225ENST00000600022 FAM105AQ9NUU6 356 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 PCDHA4Q9UN74 947 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 KCNJ14Q9UNX9 436 aa15.32■□□□□ 0.04
IRF3-225ENST00000600022 PIN4Q9Y237 131 aaKnown RBP15.32■□□□□ 0.04
IRF3-225ENST00000600022 DEXIO95424 95 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
IRF3-225ENST00000600022 ZSCAN22P10073 491 aaPredicted RBP15.31■□□□□ 0.04
IRF3-225ENST00000600022 MYBP10242 640 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 CTSAP10619 480 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 ITIH3Q06033 890 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 INF2Q27J81 1249 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 TAS1R1Q7RTX1 841 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 DDX53Q86TM3 631 aaKnown RBP15.31■□□□□ 0.04
IRF3-225ENST00000600022 BLIDQ8IZY5 108 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 TRAIPQ9BWF2 469 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 SH3GLB2Q9NR46 395 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 SORCS3Q9UPU3 1222 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
IRF3-225ENST00000600022 GFRA3O60609 400 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 ZNF623O75123 536 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 SRGAP2CP0DJJ0 459 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
IRF3-225ENST00000600022 MCM4P33991 863 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 SSRP1Q08945 709 aaKnown RBP15.3■□□□□ 0.04
IRF3-225ENST00000600022 UBXN11Q5T124 520 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 CATSPER4Q7RTX7 472 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
IRF3-225ENST00000600022 WASF1Q92558 559 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 MRPL9Q9BYD2 267 aaKnown RBP15.3■□□□□ 0.04
IRF3-225ENST00000600022 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 MTMR6Q9Y217 621 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 PCDHB2Q9Y5E7 798 aa15.3■□□□□ 0.04
IRF3-225ENST00000600022 SPTBN4Q9H254 2564 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 F8W810 466 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 PI15O43692 258 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 LILRB3O75022 631 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 CNPP09543 421 aaKnown RBP15.29■□□□□ 0.04
IRF3-225ENST00000600022 MTHFRP42898 656 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 DNM2P50570 870 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 MTMR3Q13615 1198 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 PTPN14Q15678 1187 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 ATAT1Q5SQI0 421 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 CLEC17AQ6ZS10 378 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 ASCL5Q7RTU5 278 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 RDM1Q8NG50 284 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 NECTIN4Q96NY8 510 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 KLHL5Q96PQ7 755 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 PRRX2Q99811 253 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 CYP26B1Q9NR63 512 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
IRF3-225ENST00000600022 DBR1Q9UK59 544 aaKnown RBP15.29■□□□□ 0.04
IRF3-225ENST00000600022 IRAK3Q9Y616 596 aa15.29■□□□□ 0.04
IRF3-225ENST00000600022 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 POMCP01189 267 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 SFPQP23246 707 aaKnown RBP eCLIP15.28■□□□□ 0.04
IRF3-225ENST00000600022 POLGP54098 1239 aaPredicted RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 PSMC5P62195 406 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 LETM2Q2VYF4 491 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 KIAA1841Q6NSI8 718 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 ZNF410Q86VK4 478 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 UBALD2Q8IYN6 164 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 ZDHHC14Q8IZN3 488 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 OXER1Q8TDS5 423 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
IRF3-225ENST00000600022 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 MIOSQ9NXC5 875 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
IRF3-225ENST00000600022 FRYLO94915 3013 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 PLXNA3P51805 1871 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 C2CD2LO14523 706 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 NRP1O14786 923 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 N4BP1O75113 896 aaKnown RBP15.27■□□□□ 0.04
IRF3-225ENST00000600022 F13A1P00488 732 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 CLCN4P51793 760 aa15.27■□□□□ 0.04
IRF3-225ENST00000600022 CDC42EP1Q00587 391 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms