RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ADAMTS1Q9UHI8 967 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 MYH11P35749 1972 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 SLC16A4O15374 487 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 KCNA2P16389 499 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 NFIL3Q16649 462 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 SND1Q7KZF4 910 aaKnown RBP eCLIP18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 CAPZA3Q96KX2 299 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 DMAC2Q9NW81 257 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 AIPL1Q9NZN9 384 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 AJAP1Q9UKB5 411 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 CSADQ9Y600 493 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 ZNF746Q6NUN9 644 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 EMBQ6PCB8 327 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 KDM7AQ6ZMT4 941 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 ANKRD35Q8N283 1001 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 RUFY1Q96T51 708 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 MKNK1Q9BUB5 465 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 RABEP2Q9H5N1 569 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 ZMYND10O75800 440 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SOX10P56693 466 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 CNTN2Q02246 1040 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 PDCLQ13371 301 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SNCBQ16143 134 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 CBWD6Q4V339 395 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SH3D19Q5HYK7 790 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 CBWD3Q5JTY5 395 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 CBWD5Q5RIA9 395 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 NAA35Q5VZE5 725 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 HAUS6Q7Z4H7 955 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 GSPT2Q8IYD1 628 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 KIFC3Q9BVG8 833 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 TRIM6Q9C030 488 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 JPH1Q9HDC5 661 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
SHKBP1-205ENST00000594973 A0A087X0T9 212 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 GOLGA6L7A0A1B0GV03 622 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 MAFGO15525 162 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 BUB1O43683 1085 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 HSF2BPO75031 334 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 TACC1O75410 805 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 FAM228BP0C875 321 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 FMO5P49326 533 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 EPHB4P54760 987 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 PTK2Q05397 1052 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 TTMPQ5BVD1 217 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 CCDC13Q8IYE1 715 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 TRIM58Q8NG06 486 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 ACCSQ96QU6 501 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 CBWD1Q9BRT8 395 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 TMEM206Q9H813 350 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 ELP3Q9H9T3 547 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 SLC40A1Q9NP59 571 aa18.47■□□□□ 0.55
SHKBP1-205ENST00000594973 CCDC169A6NNP5 214 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ZNF862O60290 1169 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 RTN2O75298 545 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 NEBLO76041 1014 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 EZRP15311 586 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 LSP1P33241 339 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 FSTL1Q12841 308 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 NNTQ13423 1086 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 SLC18A3Q16572 532 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ZNF572Q7Z3I7 529 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 CAVIN3Q969G5 261 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 OTUD5Q96G74 571 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 CEP170P1Q96L14 293 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 RBAK-RBAKDNI3L0D1 243 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ZNF185O15231 689 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ZKSCAN8Q15776 578 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 MOB2Q70IA6 237 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 IRF2BP2Q7Z5L9 587 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ZNF473Q8WTR7 871 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 ANKEF1Q9NU02 776 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 BTBD7Q9P203 1132 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 SLC9A2Q9UBY0 812 aa18.46■□□□□ 0.55
SHKBP1-205ENST00000594973 MYPNQ86TC9 1320 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 IRF6O14896 467 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 TNFRSF8P28908 595 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 BFSP1Q12934 665 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 GNPTABQ3T906 1256 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ZSWIM2Q8NEG5 633 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 CLMNQ96JQ2 1002 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ATP6V0A4Q9HBG4 840 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 LOXHD1Q8IVV2 1947 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 GTPBP10A4D1E9 387 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 PSAPP07602 524 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 MAPTP10636 758 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ACTR2P61160 394 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 DLG4P78352 724 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 SP2Q02086 613 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 MAP2K1Q02750 393 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 TTC19Q6DKK2 380 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 C6orf89Q6UWU4 347 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ZNF571Q7Z3V5 609 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 TAX1BP1Q86VP1 789 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 CCDC60Q8IWA6 550 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms