RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF746Q6NUN9 644 aaPredicted RBP17.81■□□□□ 0.44
LIG1-206ENST00000594067 CACNA2D3Q8IZS8 1091 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 KRT35Q92764 455 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
LIG1-206ENST00000594067 PHF20L1A8MW92 1017 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 PPFIA2O75334 1257 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 ENTPD3O75355 529 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 FTLP02792 175 aaPredicted RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 RDXP35241 583 aaKnown RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 MARCKSL1P49006 195 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 PLTPP55058 493 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 FKBP1AP62942 108 aaKnown RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 LACTB2Q53H82 288 aaPredicted RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 CYB5D1Q6P9G0 228 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 TEKT3Q9BXF9 490 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
LIG1-206ENST00000594067 VCAM1P19320 739 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 PPP3CAQ08209 521 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 WLSQ5T9L3 541 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 ARMC9Q7Z3E5 817 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 JAMLQ86YT9 394 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 STRA6Q9BX79 667 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 TXLNGYQ9BZA5 131 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 ARHGEF10LQ9HCE6 1279 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 ZDHHC18Q9NUE0 388 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
LIG1-206ENST00000594067 ATRNL1Q5VV63 1379 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 IPO5O00410 1097 aaKnown RBP17.79■□□□□ 0.44
LIG1-206ENST00000594067 SHBGP04278 402 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 BCRP11274 1271 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 GCLMP48507 274 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 AOC3Q16853 763 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 PADI6Q6TGC4 694 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 PARP9Q8IXQ6 854 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
LIG1-206ENST00000594067 ZSWIM2Q8NEG5 633 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 C18orf8Q96DM3 657 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 PSMD1Q99460 953 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 HAUS2Q9NVX0 235 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 CAND2O75155 1236 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 DRD4P21917 467 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 SCTRP47872 440 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 GKAP1Q5VSY0 366 aaPredicted RBP17.79■□□□□ 0.44
LIG1-206ENST00000594067 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 SLC9A9Q8IVB4 645 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 FMNL3Q8IVF7 1028 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 RHOT2Q8IXI1 618 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 MDM1Q8TC05 714 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 CCT6BQ92526 530 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 KAT5Q92993 513 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 TLCD1Q96CP7 247 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 SGSM3Q96HU1 749 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 TACO1Q9BSH4 297 aaKnown RBP17.79■□□□□ 0.44
LIG1-206ENST00000594067 KCND2Q9NZV8 630 aa17.79■□□□□ 0.44
LIG1-206ENST00000594067 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 CBWD1Q9BRT8 395 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 EPB41L4BQ9H329 900 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 MCM8Q9UJA3 840 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 FAM187AA6NFU0 413 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 MUTP22033 750 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 VAMP7P51809 220 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 TRAF1Q13077 416 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 SNCBQ16143 134 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 ZDHHC24Q6UX98 284 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 CPLX4Q7Z7G2 160 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 FBXO25Q8TCJ0 367 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 RANBP17Q9H2T7 1088 aaKnown RBP17.78■□□□□ 0.44
LIG1-206ENST00000594067 EHMT1Q9H9B1 1298 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
LIG1-206ENST00000594067 MRPL11Q9Y3B7 192 aaKnown RBP17.78■□□□□ 0.44
LIG1-206ENST00000594067 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 KIAA0391O15091 583 aaKnown RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 ATMINO43313 823 aaPredicted RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 PMS2P54278 862 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 DHX34Q14147 1143 aaKnown RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 NEDD9Q14511 834 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 MESDQ14696 234 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 PPP2R5EQ16537 467 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 ERMARDQ5T6L9 678 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 B3GNT9Q6UX72 402 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 COL11A2P13942 1736 aaPredicted RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 SMIM23A6NLE4 172 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 C21orf2O43822 256 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 XRCC4Q13426 336 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 CHADLQ6NUI6 762 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 TRMT1LQ7Z2T5 733 aaKnown RBP17.77■□□□□ 0.44
LIG1-206ENST00000594067 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 PCDHB18PQ96TA0 734 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 ACP6Q9NPH0 428 aa17.77■□□□□ 0.44
LIG1-206ENST00000594067 TLDC2A0PJX2 215 aa17.76■□□□□ 0.43
LIG1-206ENST00000594067 SGPL1O95470 568 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms