RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 EPCAMP16422 314 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 LAMTOR4Q0VGL1 99 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 EMC2Q15006 297 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 ATAT1Q5SQI0 421 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 CABP7Q86V35 215 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 UBALD2Q8IYN6 164 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 C12orf76Q8N812 135 aaPredicted RBP25.3■■□□□ 1.64
SSBP4-203ENST00000593641 ZNF579Q8NAF0 562 aaKnown RBP25.3■■□□□ 1.64
SSBP4-203ENST00000593641 TDRD5Q8NAT2 981 aaKnown RBP25.3■■□□□ 1.64
SSBP4-203ENST00000593641 BCL7CQ8WUZ0 217 aaPredicted RBP25.3■■□□□ 1.64
SSBP4-203ENST00000593641 HAS1Q92839 578 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 KANSL3Q9P2N6 904 aa25.3■■□□□ 1.64
SSBP4-203ENST00000593641 DBR1Q9UK59 544 aaKnown RBP25.3■■□□□ 1.64
SSBP4-203ENST00000593641 ERLIN2O94905 339 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 BAG4O95429 457 aaKnown RBP25.29■■□□□ 1.64
SSBP4-203ENST00000593641 WEE2P0C1S8 567 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 VCPP55072 806 aaKnown RBP25.29■■□□□ 1.64
SSBP4-203ENST00000593641 AGMOQ6ZNB7 445 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 ZNF280BQ86YH2 543 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 POTEDQ86YR6 584 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 SLFN12Q8IYM2 578 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 RNF149Q8NC42 400 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 OXER1Q8TDS5 423 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 WASF1Q92558 559 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 EMILIN2Q9BXX0 1053 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 ZSWIM4Q9H7M6 989 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 MINDY3Q9H8M7 445 aa25.29■■□□□ 1.64
SSBP4-203ENST00000593641 DENND4AQ7Z401 1863 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 ASAP2O43150 1006 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 PFKFB2O60825 505 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 PTPN14Q15678 1187 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 XKR9Q5GH70 373 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 MRPL10Q7Z7H8 261 aaKnown RBP25.28■■□□□ 1.64
SSBP4-203ENST00000593641 FERMT3Q86UX7 667 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 MTRQ99707 1265 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 TMEM175Q9BSA9 504 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 BRMS1Q9HCU9 246 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 GJB4Q9NTQ9 266 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 RGL1Q9NZL6 768 aa25.28■■□□□ 1.64
SSBP4-203ENST00000593641 TDRD15B5MCY1 1934 aaKnown RBP25.27■■□□□ 1.64
SSBP4-203ENST00000593641 ALDH2P05091 517 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 AVPR2P30518 371 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 CYP4A11Q02928 519 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 TCF15Q12870 199 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 CNNM3Q8NE01 707 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 SLC22A17Q8WUG5 538 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 DYDC2Q96IM9 177 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 PHOX2BQ99453 314 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 SFXN1Q9H9B4 322 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 ORC3Q9UBD5 711 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-203ENST00000593641 TPCN1Q9ULQ1 816 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 USTQ9Y2C2 406 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 FAN1Q9Y2M0 1017 aa25.27■■□□□ 1.64
SSBP4-203ENST00000593641 C2orf16Q68DN1 1984 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 B4GALT3O60512 393 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 DDHD2O94830 711 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 POMCP01189 267 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 HOXA11P31270 313 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-203ENST00000593641 CTTNQ14247 550 aaKnown RBP25.26■■□□□ 1.63
SSBP4-203ENST00000593641 TMC5Q6UXY8 1006 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 PLCD3Q8N3E9 789 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 VN1R3Q9BXE9 311 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 IRF2BPLQ9H1B7 796 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 UBN1Q9NPG3 1134 aa25.26■■□□□ 1.63
SSBP4-203ENST00000593641 BRD1O95696 1058 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 SSBP05455 408 aaKnown RBP eCLIP25.25■■□□□ 1.63
SSBP4-203ENST00000593641 NCLP19338 710 aaKnown RBP25.25■■□□□ 1.63
SSBP4-203ENST00000593641 KLRC2P26717 231 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 KRT2P35908 639 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 NCBP1Q09161 790 aaKnown RBP25.25■■□□□ 1.63
SSBP4-203ENST00000593641 MXD4Q14582 209 aaPredicted RBP25.25■■□□□ 1.63
SSBP4-203ENST00000593641 ANKRD1Q15327 319 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 PCBP1Q15365 356 aaKnown RBP eCLIP25.25■■□□□ 1.632e-10■■■■□ 20.9
SSBP4-203ENST00000593641 UBXN11Q5T124 520 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 KANK3Q6NY19 840 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 TPH2Q8IWU9 490 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 ZDHHC14Q8IZN3 488 aa25.25■■□□□ 1.63
SSBP4-203ENST00000593641 MRPL17Q9NRX2 175 aaKnown RBP25.25■■□□□ 1.63
SSBP4-203ENST00000593641 ITGA4P13612 1032 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 AXLP30530 894 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 AFF1P51825 1210 aaKnown RBP25.24■■□□□ 1.63
SSBP4-203ENST00000593641 SPIRE1Q08AE8 756 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 TFDP1Q14186 410 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 EARS2Q5JPH6 523 aaKnown RBP25.24■■□□□ 1.63
SSBP4-203ENST00000593641 NOTUMQ6P988 496 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 CCDC51Q96ER9 411 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 CCDC43Q96MW1 224 aaKnown RBP25.24■■□□□ 1.63
SSBP4-203ENST00000593641 KLHL5Q96PQ7 755 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 USP34Q70CQ2 3546 aa25.24■■□□□ 1.63
SSBP4-203ENST00000593641 NRP1O14786 923 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 DTNBO60941 627 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 PDGFBP01127 241 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-203ENST00000593641 URODP06132 367 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 ASGR2P07307 311 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 NR5A1Q13285 461 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 CCDC149Q6ZUS6 474 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 ACSF2Q96CM8 615 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-203ENST00000593641 LIMD1Q9UGP4 676 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 IPPQ9Y573 584 aa25.23■■□□□ 1.63
SSBP4-203ENST00000593641 FAM205CA6NFA0 338 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms