RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 LXNQ9BS40 222 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 EIF2AQ9BY44 585 aaKnown RBP11.94□□□□□ -0.5
USE1-203ENST00000593597 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 TRIP11Q15643 1979 aa11.94□□□□□ -0.5
USE1-203ENST00000593597 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 PFKFB2O60825 505 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
USE1-203ENST00000593597 AVPR2P30518 371 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 CA8P35219 290 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 DNM2P50570 870 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 POLGP54098 1239 aaPredicted RBP11.93□□□□□ -0.5
USE1-203ENST00000593597 CYP4A11Q02928 519 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 ITIH3Q06033 890 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 ST3GAL1Q11201 340 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
USE1-203ENST00000593597 EMC2Q15006 297 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 EPHA7Q15375 998 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 AMHR2Q16671 573 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 TAS1R1Q7RTX1 841 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
USE1-203ENST00000593597 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 RNF168Q8IYW5 571 aaPredicted RBP11.93□□□□□ -0.5
USE1-203ENST00000593597 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 MIOSQ9NXC5 875 aa11.93□□□□□ -0.5
USE1-203ENST00000593597 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 TSPAN1O60635 241 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
USE1-203ENST00000593597 CNPP09543 421 aaKnown RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 YWHABP31946 246 aaKnown RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 RFC5P40937 340 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 RAB27AP51159 221 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 CLCN4P51793 760 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 PTPN5P54829 565 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 NCAPH2Q6IBW4 605 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 TMEM105Q8N8V8 129 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 ASAP3Q8TDY4 903 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 PSPC1Q8WXF1 523 aaKnown RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 RIPOR3Q96MK2 946 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 KLHL5Q96PQ7 755 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 INO80BQ9C086 356 aaPredicted RBP11.92□□□□□ -0.5
USE1-203ENST00000593597 RSAD1Q9HA92 442 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 SORCS3Q9UPU3 1222 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 HES2Q9Y543 173 aa11.92□□□□□ -0.5
USE1-203ENST00000593597 COL4A3Q01955 1670 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 ZNF292O60281 2723 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 NRP1O14786 923 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 TBX3O15119 743 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 INPPL1O15357 1258 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 N4BP1O75113 896 aaKnown RBP11.91□□□□□ -0.5
USE1-203ENST00000593597 SLITRK3O94933 977 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 POMCP01189 267 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 SKIP12755 728 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
USE1-203ENST00000593597 MTHFRP42898 656 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 AK2P54819 239 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 RNASELQ05823 741 aaKnown RBP11.91□□□□□ -0.5
USE1-203ENST00000593597 DSC1Q08554 894 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 CAPSQ13938 189 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 ZDHHC14Q8IZN3 488 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 RNF149Q8NC42 400 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 SLC7A3Q8WY07 619 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 RSPH1Q8WYR4 309 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 CPB2Q96IY4 423 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 DZANK1Q9NVP4 752 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 NR2E1Q9Y466 385 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 IPPQ9Y573 584 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 FRYLO94915 3013 aa11.91□□□□□ -0.5
USE1-203ENST00000593597 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 A0A087WWV3 80 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 B4GALT5O43286 388 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 MLH1P40692 756 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 PTENP60484 403 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 MBTD1Q05BQ5 628 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 MTMR3Q13615 1198 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 ME3Q16798 604 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 XKR9Q5GH70 373 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 ZBTB33Q86T24 672 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms