RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 MRPL10Q7Z7H8 261 aaKnown RBP14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 TMEM173Q86WV6 379 aaPredicted RBP14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 SMRP1Q8NCR6 262 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 TMEM169Q96HH4 297 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 POLR3FQ9H1D9 316 aaPredicted RBP14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 NRDE2Q9H7Z3 1164 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 RSAD1Q9HA92 442 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
PRKCSH-218ENST00000593053 FSD2A1L4K1 749 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 GALTP07902 379 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 AXLP30530 894 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 CA8P35219 290 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 TRAPPC10P48553 1259 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 AFF1P51825 1210 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 MBTD1Q05BQ5 628 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 SMC1AQ14683 1233 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 PCBP1Q15365 356 aaKnown RBP eCLIP14.54□□□□□ -0.081e-6■■□□□ 12.7
PRKCSH-218ENST00000593053 LLGL2Q6P1M3 1020 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 POTEGQ6S5H5 508 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 URGCPQ8TCY9 931 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 DNAJB4Q9UDY4 337 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 DBR1Q9UK59 544 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 PLXNA4Q9HCM2 1894 aa14.54□□□□□ -0.08
PRKCSH-218ENST00000593053 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 FAM86C2PA6NEL3 165 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 B4GALT3O60512 393 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 ITGA4P13612 1032 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 NCLP19338 710 aaKnown RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 U2AF2P26368 475 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 RPA1P27694 616 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 SLC11A1P49279 550 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 AMHR2Q16671 573 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 TMEM31Q5JXX7 168 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 NOTUMQ6P988 496 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 ZNF280BQ86YH2 543 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 C4orf32Q8N8J7 132 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 MRPL43Q8N983 215 aaKnown RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 CNNM3Q8NE01 707 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 MCPH1Q8NEM0 835 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 BCL7CQ8WUZ0 217 aaPredicted RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 CCDC51Q96ER9 411 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 IGSF21Q96ID5 467 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 POP1Q99575 1024 aaKnown RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 NFKBIZQ9BYH8 718 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 UPF2Q9HAU5 1272 aaKnown RBP14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 RAPGEFL1Q9UHV5 662 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 IPPQ9Y573 584 aa14.53□□□□□ -0.08
PRKCSH-218ENST00000593053 ARHGEF35A5YM69 484 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 CARNS1A5YM72 827 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 C2orf71A6NGG8 1288 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 B4GALT5O43286 388 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 DDHD2O94830 711 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 CXCL14O95715 111 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 POMCP01189 267 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 ALADP13716 330 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 ARF4P18085 180 aaPredicted RBP14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 CCT6AP40227 531 aaKnown RBP14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 TOB1P50616 345 aaPredicted RBP14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 FXR2P51116 673 aaKnown RBP eCLIP14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 KCNC3Q14003 757 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 AUTS2Q8WXX7 1259 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 TMX3Q96JJ7 454 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 LRFN3Q9BTN0 628 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 CSRNP2Q9H175 543 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 UBN1Q9NPG3 1134 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 KANSL3Q9P2N6 904 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 LRWD1Q9UFC0 647 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 KIF3AQ9Y496 699 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 HES2Q9Y543 173 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
PRKCSH-218ENST00000593053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 DCXO43602 365 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 MLH1P40692 756 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 PTGDRQ13258 359 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 BMS1Q14692 1282 aaKnown RBP14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 ECM1Q16610 540 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 MCTP1Q6DN14 999 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 ANKRD54Q6NXT1 300 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 PADI6Q6TGC4 694 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 TMEM184AQ6ZMB5 413 aa14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 DDX53Q86TM3 631 aaKnown RBP14.51□□□□□ -0.09
PRKCSH-218ENST00000593053 CDR2LQ86X02 465 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms