RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TMEM161BQ8NDZ6 487 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 TOP1MTQ969P6 601 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 SEL1LQ9UBV2 794 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 TRIOBPQ9H2D6 2365 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 CNTNAP2Q9UHC6 1331 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 K7ENM7 598 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 ACKR2O00590 384 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 ZNF202O95125 648 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 GJB5O95377 273 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 SMAD3P84022 425 aaKnown RBP16.44■□□□□ 0.22
DDX39A-221ENST00000593026 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
DDX39A-221ENST00000593026 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 HERC4Q5GLZ8 1057 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-221ENST00000593026 GPR153Q6NV75 609 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 CNNM4Q6P4Q7 775 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 KRBA2Q6ZNG9 492 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 HAUS6Q7Z4H7 955 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 NPAS4Q8IUM7 802 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 FAM178BQ8IXR5 827 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 FMR1NBQ8N0W7 255 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-221ENST00000593026 CNNM3Q8NE01 707 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 C7orf25Q9BPX7 421 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 TMEM134Q9H6X4 195 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 PANK4Q9NVE7 773 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
DDX39A-221ENST00000593026 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 FRMD3A2A2Y4 597 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 TLL1O43897 1013 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-221ENST00000593026 MAPTP10636 758 aaKnown RBP16.43■□□□□ 0.22
DDX39A-221ENST00000593026 SKIP12755 728 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 SCP2P22307 547 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 RAB27AP51159 221 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 RABGGTBP53611 331 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 STRN3Q13033 797 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 RAB30Q15771 203 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 PAGE5Q96GU1 130 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 CCDC34Q96HJ3 373 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 TRAIPQ9BWF2 469 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 MSRAQ9UJ68 235 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 PCDHB7Q9Y5E2 793 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 PCDHA11Q9Y5I1 949 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 TTC3P53804 2025 aa16.43■□□□□ 0.22
DDX39A-221ENST00000593026 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
DDX39A-221ENST00000593026 EDN1P05305 212 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 CASP1P29466 404 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 NMT1P30419 496 aaKnown RBP16.42■□□□□ 0.22
DDX39A-221ENST00000593026 ABCD1P33897 745 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 UBE2HP62256 183 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 FAM189BP81408 668 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 COASYQ13057 564 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 SLC27A1Q6PCB7 646 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 TAS1R3Q7RTX0 852 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 ECHDC2Q86YB7 292 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 ENGASEQ8NFI3 743 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 FIZ1Q96SL8 496 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 RAD9AQ99638 391 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
DDX39A-221ENST00000593026 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 ELAC1Q9H777 363 aaKnown RBP16.42■□□□□ 0.22
DDX39A-221ENST00000593026 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
DDX39A-221ENST00000593026 OLFML3Q9NRN5 406 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 FAM105AQ9NUU6 356 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 GBF1Q92538 1859 aa16.42■□□□□ 0.22
DDX39A-221ENST00000593026 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-221ENST00000593026 N4BP3O15049 544 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 MYL1P05976 194 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 DNAJB2P25686 324 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 PBX2P40425 430 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 HTRA4P83105 476 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-221ENST00000593026 SNW1Q13573 536 aaKnown RBP16.41■□□□□ 0.22
DDX39A-221ENST00000593026 CUL4BQ13620 913 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 UBXN11Q5T124 520 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 NT5DC1Q5TFE4 455 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 ATF7IP2Q5U623 682 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 UNC13DQ70J99 1090 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 CDR2LQ86X02 465 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-221ENST00000593026 CRIPAKQ8N1N5 446 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 KCNN1Q92952 543 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 ADPGKQ9BRR6 497 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-221ENST00000593026 ST6GALNAC4Q9H4F1 302 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms