RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TRAF1Q13077 416 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 MTMR1Q13613 665 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 COL28A1Q2UY09 1125 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 NOMO2Q5JPE7 1267 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 ZNF484Q5JVG2 852 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 RNF43Q68DV7 783 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 HEATR6Q6AI08 1181 aaKnown RBP7.37□□□□□ -1.23
DNMT1-222ENST00000590619 POTEHQ6S545 545 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 CEP68Q76N32 757 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 METTL13Q8N6R0 699 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 ITFG1Q8TB96 612 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 LOXL4Q96JB6 756 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 ZNF668Q96K58 619 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-222ENST00000590619 PHF20Q9BVI0 1012 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-222ENST00000590619 STK39Q9UEW8 545 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 SSX2IPQ9Y2D8 614 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 MSRB2Q9Y3D2 182 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 ADAMTS20P59510 1910 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 LAMA4Q16363 1823 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 NEDD4P46934 1319 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 DOCK6Q96HP0 2047 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 PIK3CDO00329 1044 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 MAN2B1O00754 1011 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
DNMT1-222ENST00000590619 CSDE1O75534 798 aaKnown RBP7.36□□□□□ -1.23
DNMT1-222ENST00000590619 ZMYND10O75800 440 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 C22orf31O95567 290 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 CEACAM1P13688 526 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 PHKA2P46019 1235 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 SLC26A2P50443 739 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 RNASELQ05823 741 aaKnown RBP7.36□□□□□ -1.23
DNMT1-222ENST00000590619 TROAPQ12815 778 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 PROSER1Q86XN7 944 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 RNF168Q8IYW5 571 aaPredicted RBP7.36□□□□□ -1.23
DNMT1-222ENST00000590619 MIER1Q8N108 512 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 SPEM1Q8N4L4 309 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 GPATCH3Q96I76 525 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 IER2Q9BTL4 223 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 C2orf42Q9NWW7 574 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 DACT1Q9NYF0 836 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 INPP5FQ9Y2H2 1132 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 NEUROG3Q9Y4Z2 214 aa7.36□□□□□ -1.23
DNMT1-222ENST00000590619 BPTFQ12830 3046 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 AKAP13Q12802 2813 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 EIF4E1BA6NMX2 242 aaKnown RBP7.35□□□□□ -1.23
DNMT1-222ENST00000590619 ZNF623O75123 536 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 ECI2O75521 394 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 EPN2O95208 641 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 URODP06132 367 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 DARSP14868 501 aaKnown RBP7.35□□□□□ -1.23
DNMT1-222ENST00000590619 DSG1Q02413 1049 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 MCMDC2Q4G0Z9 681 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 TANGO2Q6ICL3 276 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 TCEAL6Q6IPX3 200 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 KIAA1211LQ6NV74 962 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 EFCAB12Q6NXP0 572 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 GLB1LQ6UWU2 654 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 ABHD15Q6UXT9 468 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 KBTBD6Q86V97 674 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 GLIS3Q8NEA6 775 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 RSPH1Q8WYR4 309 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 FAM3CQ92520 227 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 TCEAL3Q969E4 200 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 FAM227BQ96M60 508 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 TMEM175Q9BSA9 504 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 HERC2P3Q9BVR0 1158 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 RNF41Q9H4P4 317 aaPredicted RBP7.35□□□□□ -1.23
DNMT1-222ENST00000590619 CHST12Q9NRB3 414 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 KCNH7Q9NS40 1196 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 CHST7Q9NS84 486 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 MARCH5Q9NX47 278 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 DACH1Q9UI36 760 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 KLK13Q9UKR3 277 aa7.35□□□□□ -1.23
DNMT1-222ENST00000590619 COL1A2P08123 1366 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 FAM221BA6H8Z2 402 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 B4E1Z4 1266 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 ZNF213O14771 459 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 PAPSS2O95340 614 aaPredicted RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 CCNE2O96020 404 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 CSRP1P21291 193 aaKnown RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 HOXA6P31267 233 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 GLUD2P49448 558 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 CLCN3P51790 818 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 C19orf57Q0VDD7 668 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 ITGB3BPQ13352 177 aaPredicted RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 LARP1BQ659C4 914 aaKnown RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 SWSAP1Q6NVH7 229 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 TRMT1LQ7Z2T5 733 aaKnown RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 CACNA2D4Q7Z3S7 1137 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 WDR5BQ86VZ2 330 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 GLYCTKQ8IVS8 523 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 LINC01465Q8N7H1 131 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms