RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 USP20Q9Y2K6 914 aa24.83■■□□□ 1.57
ACTN4-210ENST00000588618 SMTNL1A8MU46 457 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 TISP43B9A030 160 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 CALUO43852 315 aaPredicted RBP24.82■■□□□ 1.56
ACTN4-210ENST00000588618 PRKCBP05771 671 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 CTSHP09668 335 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 CRYBB1P53674 252 aaPredicted RBP24.82■■□□□ 1.56
ACTN4-210ENST00000588618 LRRC63Q05C16 580 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 GOLGA5Q8TBA6 731 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 CELF4Q9BZC1 486 aaKnown RBP24.82■■□□□ 1.56
ACTN4-210ENST00000588618 ADAMTS10Q9H324 1103 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 CDHR5Q9HBB8 845 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 TYW1Q9NV66 732 aaKnown RBP24.82■■□□□ 1.56
ACTN4-210ENST00000588618 PRMT7Q9NVM4 692 aaPredicted RBP24.82■■□□□ 1.56
ACTN4-210ENST00000588618 TRPV2Q9Y5S1 764 aa24.82■■□□□ 1.56
ACTN4-210ENST00000588618 GOLGA6L19H0YKK7 550 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 IKBKBO14920 756 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 HNRNPDLO14979 420 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 CAND2O75155 1236 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 CSDE1O75534 798 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 IQCF3P0C7M6 154 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 C1orf53Q5VUE5 145 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 PPP4R3CPQ6ZMV5 832 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 IFNLR1Q8IU57 520 aaPredicted RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 DHX38Q92620 1227 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 EEF2KMTQ96G04 330 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 CDY2AQ9Y6F7 541 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 TTLL13PA6NNM8 815 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 PDXKO00764 312 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 ERLIN2O94905 339 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 EIF4BP23588 611 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 LIG4P49917 911 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 MBTD1Q05BQ5 628 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 NCBP1Q09161 790 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 ANKRD33Q7Z3H0 272 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 CAGE1Q8TC20 777 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 MRPL4Q9BYD3 311 aaKnown RBP24.81■■□□□ 1.56
ACTN4-210ENST00000588618 NFE2L3Q9Y4A8 694 aa24.81■■□□□ 1.56
ACTN4-210ENST00000588618 EN2P19622 333 aaPredicted RBP24.8■■□□□ 1.56
ACTN4-210ENST00000588618 SFPQP23246 707 aaKnown RBP eCLIP24.8■■□□□ 1.561e-6■■■□□ 17.2
ACTN4-210ENST00000588618 TPM4P67936 248 aa24.8■■□□□ 1.56
ACTN4-210ENST00000588618 BFSP2Q13515 415 aa24.8■■□□□ 1.56
ACTN4-210ENST00000588618 TRIM60Q495X7 471 aa24.8■■□□□ 1.56
ACTN4-210ENST00000588618 TOX2Q96NM4 488 aa24.8■■□□□ 1.56
ACTN4-210ENST00000588618 FANCLQ9NW38 375 aa24.8■■□□□ 1.56
ACTN4-210ENST00000588618 DARSP14868 501 aaKnown RBP24.79■■□□□ 1.56
ACTN4-210ENST00000588618 PRPF4BQ13523 1007 aaKnown RBP24.79■■□□□ 1.56
ACTN4-210ENST00000588618 PCBP1Q15365 356 aaKnown RBP eCLIP24.79■■□□□ 1.56
ACTN4-210ENST00000588618 SPATA1Q5VX52 437 aa24.79■■□□□ 1.56
ACTN4-210ENST00000588618 SLC39A4Q6P5W5 647 aa24.79■■□□□ 1.56
ACTN4-210ENST00000588618 PRIMPOLQ96LW4 560 aa24.79■■□□□ 1.56
ACTN4-210ENST00000588618 SAMSN1Q9NSI8 373 aaKnown RBP24.79■■□□□ 1.56
ACTN4-210ENST00000588618 CGNQ9P2M7 1197 aaKnown RBP24.79■■□□□ 1.56
ACTN4-210ENST00000588618 TRAF3IP3Q9Y228 551 aa24.79■■□□□ 1.56
ACTN4-210ENST00000588618 ATP11BQ9Y2G3 1177 aa24.79■■□□□ 1.56
ACTN4-210ENST00000588618 ANKRD63C9JTQ0 380 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 ACKR2O00590 384 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 CD4P01730 458 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 SNRPFP62306 86 aaKnown RBP24.78■■□□□ 1.56
ACTN4-210ENST00000588618 SNX17Q15036 470 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 TRIM71Q2Q1W2 868 aaKnown RBP24.78■■□□□ 1.56
ACTN4-210ENST00000588618 HSP90AA4PQ58FG1 418 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 CSGALNACT2Q8N6G5 542 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 FZD8Q9H461 694 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 GOLGA6L3A6NEY3 463 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 CLIC2O15247 247 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 FGFR1OPO95684 399 aaKnown RBP24.78■■□□□ 1.56
ACTN4-210ENST00000588618 CKBP12277 381 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 RPL13P26373 211 aaKnown RBP24.78■■□□□ 1.56
ACTN4-210ENST00000588618 MATR3P43243 847 aaKnown RBP eCLIP24.78■■□□□ 1.563e-7■□□□□ 8.1
ACTN4-210ENST00000588618 TLE2Q04725 743 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 LRRC55Q6ZSA7 311 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 CATSPER4Q7RTX7 472 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 TMEM40Q8WWA1 233 aa24.78■■□□□ 1.56
ACTN4-210ENST00000588618 FKBP3Q00688 224 aaKnown RBP24.77■■□□□ 1.56
ACTN4-210ENST00000588618 FAM187BQ17R55 369 aa24.77■■□□□ 1.56
ACTN4-210ENST00000588618 EDRF1Q3B7T1 1238 aa24.77■■□□□ 1.56
ACTN4-210ENST00000588618 FOXR2Q6PJQ5 311 aa24.77■■□□□ 1.56
ACTN4-210ENST00000588618 IRF2BP1Q8IU81 584 aa24.77■■□□□ 1.56
ACTN4-210ENST00000588618 AGPAT3Q9NRZ7 376 aa24.77■■□□□ 1.56
ACTN4-210ENST00000588618 CHRNA1P02708 482 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 ATP1A3P13637 1013 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 AMHR2Q16671 573 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 ZNF618Q5T7W0 954 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 ARMCX5Q6P1M9 558 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 ZPBP2Q6X784 338 aa24.76■■□□□ 1.55
ACTN4-210ENST00000588618 ZC3H3Q8IXZ2 948 aaKnown RBP24.76■■□□□ 1.55
ACTN4-210ENST00000588618 TARS2Q9BW92 718 aaKnown RBP24.76■■□□□ 1.55
ACTN4-210ENST00000588618 SRRTQ9BXP5 876 aaKnown RBP24.76■■□□□ 1.55
ACTN4-210ENST00000588618 B4GALT5O43286 388 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 ZNF18P17022 549 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 FGFR4P22455 802 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 NR2F2P24468 414 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 ADSSP30520 456 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 MGAT3Q09327 533 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 COL13A1Q5TAT6 717 aaPredicted RBP24.75■■□□□ 1.55
ACTN4-210ENST00000588618 SLFN12LQ6IEE8 588 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 TCHPQ9BT92 498 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 GRPEL1Q9HAV7 217 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 CETN3O15182 167 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms