RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 GBP1P32455 592 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 ATXN3P54252 364 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 AK2P54819 239 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 NTHL1P78549 312 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 MAPK8IP2Q13387 824 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 MAPK6Q16659 721 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 CLLU1OSQ5K130 101 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 C1orf228Q6PIY5 440 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 ITFG1Q8TB96 612 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 BAP1Q92560 729 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 PIGKQ92643 395 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 ELSPBP1Q96BH3 223 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 PI4K2AQ9BTU6 479 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 TRMT61BQ9BVS5 477 aaKnown RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 ZNF334Q9HCZ1 680 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 KIAA1522Q9P206 1035 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 MBD1Q9UIS9 605 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 MAN2B2Q9Y2E5 1009 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 MUC22E2RYF6 1773 aaPredicted RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 PTPRCP08575 1304 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 MGAQ8IWI9 3026 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 WDR81Q562E7 1941 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 RRN3P2A6NIE6 340 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ZMYND10O75800 440 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 MBD4O95243 580 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 GALTP07902 379 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 CD59P13987 128 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 NDUFV2P19404 249 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 MLLT6P55198 1093 aaPredicted RBP8.04□□□□□ -1.12
TPM4-210ENST00000588507 IGBP1P78318 339 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
TPM4-210ENST00000588507 GRM2Q14416 872 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 CCDC96Q2M329 555 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 PMS2CLQ68D20 193 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 HIST2H2BCQ6DN03 193 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 TANGO2Q6ICL3 276 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ZNF746Q6NUN9 644 aaPredicted RBP8.04□□□□□ -1.12
TPM4-210ENST00000588507 BTNL9Q6UXG8 535 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 SLCO6A1Q86UG4 719 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 GALNT15Q8N3T1 639 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 SYNPOQ8N3V7 929 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 NME8Q8N427 588 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 CAMKK1Q8N5S9 505 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 HELQQ8TDG4 1101 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 MSANTD3Q96H12 275 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 CAMK1GQ96NX5 476 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 RPS6KC1Q96S38 1066 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
TPM4-210ENST00000588507 ZNF287Q9HBT7 754 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 PXMP2Q9NR77 195 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 EML5Q05BV3 1969 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ATMQ13315 3056 aa8.04□□□□□ -1.12
TPM4-210ENST00000588507 ZBED9Q6R2W3 1325 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 ABCA7Q8IZY2 2146 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 ABCA2Q9BZC7 2435 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 TCRBV5S4A2TA0A5A2 114 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 TLX3O43711 291 aaPredicted RBP8.03□□□□□ -1.12
TPM4-210ENST00000588507 SH3BP5O60239 455 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 URODP06132 367 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 MYCLP12524 364 aaPredicted RBP8.03□□□□□ -1.12
TPM4-210ENST00000588507 KRT10P13645 584 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 RPL17P18621 184 aaKnown RBP8.03□□□□□ -1.12
TPM4-210ENST00000588507 DSC3Q14574 896 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 TTF1Q15361 905 aaPredicted RBP8.03□□□□□ -1.12
TPM4-210ENST00000588507 METTL7BQ6UX53 244 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 C11orf74Q86VG3 221 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 ECHDC2Q86YB7 292 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 PALB2Q86YC2 1186 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 MARCH9Q86YJ5 346 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 NPAS3Q8IXF0 933 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 NEDD1Q8NHV4 660 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 ZBTB10Q96DT7 871 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 GINS2Q9Y248 185 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 MTCL1Q9Y4B5 1905 aaKnown RBP8.03□□□□□ -1.12
TPM4-210ENST00000588507 F8P00451 2351 aa8.03□□□□□ -1.12
TPM4-210ENST00000588507 TGM5O43548 720 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 TSPY3P0CV98 308 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 TSPY8P0CW00 308 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 HSPD1P10809 573 aaKnown RBP8.02□□□□□ -1.13
TPM4-210ENST00000588507 HLA-EP13747 358 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 DHPSP49366 369 aaPredicted RBP8.02□□□□□ -1.13
TPM4-210ENST00000588507 NEDD9Q14511 834 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 USH1GQ495M9 461 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
TPM4-210ENST00000588507 SBK1Q52WX2 424 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 WDR44Q5JSH3 913 aa8.02□□□□□ -1.13
TPM4-210ENST00000588507 PPP4R3BQ5MIZ7 849 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms