RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 EPHB4P54760 987 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 SNRPFP62306 86 aaKnown RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 FAM189BP81408 668 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 GTF2BQ00403 316 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 CUL4BQ13620 913 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 DSC3Q14574 896 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 KCNB1Q14721 858 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 KYAT1Q16773 422 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 RASIP1Q5U651 963 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 ZPBP2Q6X784 338 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 TDHQ8IZJ6 230 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 TOP1MTQ969P6 601 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 PGBD4Q96DM1 585 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 RNPC3Q96LT9 517 aaKnown RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 SLC9A7Q96T83 725 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 ADAM2Q99965 735 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 ADPGKQ9BRR6 497 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 MRPL4Q9BYD3 311 aaKnown RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 CCDC113Q9H0I3 377 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 PRO3102Q9H379 93 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 POLD4Q9HCU8 107 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 PIN4Q9Y237 131 aaKnown RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 MYH9P35579 1960 aaKnown RBP9.96□□□□□ -0.81
CIRBP-218ENST00000588344 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 ZBBXA8MT70 800 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 K7ENM7 598 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 EIF3DO15371 548 aaKnown RBP eCLIP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 HOXA2O43364 376 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TSPAN1O60635 241 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 CSDE1O75534 798 aaKnown RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TOM1L1O75674 476 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 RHOBTB3O94955 611 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 GCNT3O95395 438 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 HOXA11P31270 313 aaPredicted RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 MCM4P33991 863 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 WDR5P61964 334 aaKnown RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 EHHADHQ08426 723 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 DPYDQ12882 1025 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 COASYQ13057 564 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SHHQ15465 462 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 AMHR2Q16671 573 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 FAM26FQ5R3K3 315 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TWF2Q6IBS0 349 aaKnown RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SLFN12LQ6IEE8 588 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SLC27A1Q6PCB7 646 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SFR1Q86XK3 245 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 SPATA20Q8TB22 786 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 ACCSQ96QU6 501 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 FIZ1Q96SL8 496 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 STRA6Q9BX79 667 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TRIM6Q9C030 488 aaPredicted RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 BLZF1Q9H2G9 400 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 CGNQ9P2M7 1197 aaKnown RBP9.96□□□□□ -0.82
CIRBP-218ENST00000588344 TNFSF13BQ9Y275 285 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 PCDHB7Q9Y5E2 793 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 CNTNAP2Q9UHC6 1331 aa9.96□□□□□ -0.82
CIRBP-218ENST00000588344 C9IYK1 514 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 CLDN3O15551 220 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 KLRC4O43908 158 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 PIGRP01833 764 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ATP2A2P16615 1042 aaKnown RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ARF4P18085 180 aaPredicted RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 FGFR4P22455 802 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 PPP1R2P41236 205 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 DCAF4L1Q3SXM0 396 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ATF7IP2Q5U623 682 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 MRPL10Q7Z7H8 261 aaKnown RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 RTN4RL1Q86UN2 441 aaPredicted RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 NPAS4Q8IUM7 802 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 GRAMD1CQ8IYS0 662 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 GOLGA5Q8TBA6 731 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ZNF507Q8TCN5 953 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 BICD1Q96G01 975 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 RAD9AQ99638 391 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 TCHPQ9BT92 498 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 KIFC3Q9BVG8 833 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 OSBPL7Q9BZF2 842 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 TMEM161AQ9NX61 479 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 LRFN2Q9ULH4 789 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 INSL6Q9Y581 213 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 UBE4BO95155 1302 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ADGRA3Q8IWK6 1321 aa9.95□□□□□ -0.82
CIRBP-218ENST00000588344 TNRC18O15417 2968 aaPredicted RBP9.95□□□□□ -0.82
CIRBP-218ENST00000588344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms