RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 FBXL6Q8N531 539 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 RIPOR3Q96MK2 946 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 MINDY3Q9H8M7 445 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 DNAJB4Q9UDY4 337 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 STK39Q9UEW8 545 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 CDH22Q9UJ99 828 aa17.78■□□□□ 0.44
ERCC1-206ENST00000588300 DTNBO60941 627 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 NEFLP07196 543 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 SLC11A1P49279 550 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 MRE11P49959 708 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 AK2P54819 239 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 CYP4A11Q02928 519 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 CTTNQ14247 550 aaKnown RBP17.77■□□□□ 0.44
ERCC1-206ENST00000588300 RARS2Q5T160 578 aaKnown RBP17.77■□□□□ 0.44
ERCC1-206ENST00000588300 MRPL10Q7Z7H8 261 aaKnown RBP17.77■□□□□ 0.44
ERCC1-206ENST00000588300 FERMT3Q86UX7 667 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 RNF149Q8NC42 400 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-206ENST00000588300 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-206ENST00000588300 MTRQ99707 1265 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 PRRX2Q99811 253 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
ERCC1-206ENST00000588300 FAM205CA6NFA0 338 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 ERLIN2O94905 339 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 HOXA11P31270 313 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-206ENST00000588300 NR5A1Q13285 461 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 PCBP1Q15365 356 aaKnown RBP eCLIP17.76■□□□□ 0.43
ERCC1-206ENST00000588300 UBXN11Q5T124 520 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 PPFIBP1Q86W92 1011 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 ZNF280BQ86YH2 543 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 TPH2Q8IWU9 490 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 CNNM3Q8NE01 707 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 ASIC4Q96FT7 647 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 TMEM175Q9BSA9 504 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 WDFY4Q6ZS81 3184 aa17.76■□□□□ 0.43
ERCC1-206ENST00000588300 C2CD4DB7Z1M9 353 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 ZBTB39O15060 712 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 B4GALT3O60512 393 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 DDHD2O94830 711 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
ERCC1-206ENST00000588300 EPCAMP16422 314 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 NCLP19338 710 aaKnown RBP17.75■□□□□ 0.43
ERCC1-206ENST00000588300 PTPN5P54829 565 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-206ENST00000588300 PTPN14Q15678 1187 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 C12orf76Q8N812 135 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-206ENST00000588300 PRSS33Q8NF86 280 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 SLC22A17Q8WUG5 538 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 VN1R3Q9BXE9 311 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
ERCC1-206ENST00000588300 DENND4AQ7Z401 1863 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 SLITRK3O94933 977 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 ALDH2P05091 517 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 WEE2P0C1S8 567 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 ITGA4P13612 1032 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 AXLP30530 894 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 NCBP1Q09161 790 aaKnown RBP17.74■□□□□ 0.43
ERCC1-206ENST00000588300 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 TFDP1Q14186 410 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 CALCRLQ16602 461 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 ATAT1Q5SQI0 421 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 IER5LQ5T953 404 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 CABP7Q86V35 215 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 KREMEN2Q8NCW0 462 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 CCDC43Q96MW1 224 aaKnown RBP17.74■□□□□ 0.43
ERCC1-206ENST00000588300 EIF2AK1Q9BQI3 630 aaKnown RBP17.74■□□□□ 0.43
ERCC1-206ENST00000588300 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 XPNPEP1Q9NQW7 623 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 DBR1Q9UK59 544 aaKnown RBP17.74■□□□□ 0.43
ERCC1-206ENST00000588300 PCDHA12Q9UN75 941 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 SORCS3Q9UPU3 1222 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
ERCC1-206ENST00000588300 ZDBF2Q9HCK1 2354 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 TDRD15B5MCY1 1934 aaKnown RBP17.73■□□□□ 0.43
ERCC1-206ENST00000588300 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 TSPAN1O60635 241 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 LYPLA2O95372 231 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 POMCP01189 267 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 AFF1P51825 1210 aaKnown RBP17.73■□□□□ 0.43
ERCC1-206ENST00000588300 PTENP60484 403 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 ME3Q16798 604 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 NOTUMQ6P988 496 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 UBALD2Q8IYN6 164 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 TDRD5Q8NAT2 981 aaKnown RBP17.73■□□□□ 0.43
ERCC1-206ENST00000588300 SMG8Q8ND04 991 aaKnown RBP17.73■□□□□ 0.43
ERCC1-206ENST00000588300 CCDC51Q96ER9 411 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 ANKEF1Q9NU02 776 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 IPPQ9Y573 584 aa17.73■□□□□ 0.43
ERCC1-206ENST00000588300 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 NRP1O14786 923 aa17.72■□□□□ 0.43
ERCC1-206ENST00000588300 DGAT1O75907 488 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms