RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 MINDY3Q9H8M7 445 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 ARHGAP28Q9P2N2 729 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 STK39Q9UEW8 545 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 FNDC1Q4ZHG4 1894 aaPredicted RBP15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 MYH11P35749 1972 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 A0A087WWV3 80 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 A0A1B0GUA9 196 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 RBAK-RBAKDNI3L0D1 243 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 SSBP05455 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 PRKCBP05771 671 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 FGFR4P22455 802 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 PPM1AP35813 382 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 UBE3AQ05086 875 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 MAPK7Q13164 816 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 GLB1LQ6UWU2 654 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 TMCO2Q7Z6W1 182 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 TMEM192Q8IY95 271 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 CCDC113Q9H0I3 377 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 SEL1LQ9UBV2 794 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 RCOR1Q9UKL0 485 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 PCDHB2Q9Y5E7 798 aa15.23■□□□□ 0.03
PRKCSH-202ENST00000585540 H3BNC9 293 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 K7ERI5 159 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 INPPL1O15357 1258 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 MAPTP10636 758 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 BMPR1AP36894 532 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 STAT6P42226 847 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 NPTX2P47972 431 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 ZNF131P52739 623 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 PEX3P56589 373 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 AMPD3Q01432 767 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 GPBP1Q86WP2 473 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 DAW1Q8N136 415 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 BSNDQ8WZ55 320 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 FAM161BQ96MY7 647 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 PCDHB12Q9Y5F1 795 aa15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 COL4A4P53420 1690 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-202ENST00000585540 FSD2A1L4K1 749 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 CCDC169A6NNP5 214 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 TBKBP1A7MCY6 615 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 CSDE1O75534 798 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 FAM13AO94988 1023 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 ATF7P17544 494 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 GAP43P17677 238 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 CTNNB1P35222 781 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 STRN3Q13033 797 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 TMEM132AQ24JP5 1023 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 TIGD5Q53EQ6 642 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 IQUBQ8NA54 791 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 MYLIPQ8WY64 445 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 MRPL4Q9BYD3 311 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 RSAD1Q9HA92 442 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 USP25Q9UHP3 1055 aa15.21■□□□□ 0.03
PRKCSH-202ENST00000585540 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 ITGA4P13612 1032 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 ME1P48163 572 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 NCKAP1LP55160 1127 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 ALCAMQ13740 583 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 MCM6Q14566 821 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 ZPBP2Q6X784 338 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 HVCN1Q96D96 273 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 CASD1Q96PB1 797 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 PLIN2Q99541 437 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 REEP2Q9BRK0 252 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 ST6GALNAC4Q9H4F1 302 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 LZTS1Q9Y250 596 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 TNFSF13BQ9Y275 285 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 IPPQ9Y573 584 aa15.2■□□□□ 0.02
PRKCSH-202ENST00000585540 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms