RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 RNF208Q9H0X6 261 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 UPF3AQ9H1J1 476 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 FOXP1Q9H334 677 aaPredicted RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 JADE2Q9NQC1 790 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 DDX20Q9UHI6 824 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 FAM184BQ9ULE4 1060 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 CNPY2Q9Y2B0 182 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 ARID2Q68CP9 1835 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 B4DLN1 442 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 TGFB3P10600 412 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 XBP1P17861 261 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 EN2P19622 333 aaPredicted RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 CNGA1P29973 690 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 DDIT3P35638 169 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 TNFAIP2Q03169 654 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 ARHGAP1Q07960 439 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 ITGB3BPQ13352 177 aaPredicted RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 INF2Q27J81 1249 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 Q4G0T1 1027 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 ALG1LQ6GMV1 187 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 Q6ZS46 218 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 HFE2Q6ZVN8 426 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 NIPA1Q7RTP0 329 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 KRT25Q7Z3Z0 450 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 C4orf32Q8N8J7 132 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 U2AF1L4Q8WU68 220 aaKnown RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 SCFD2Q8WU76 684 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 TTC9Q92623 222 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 GPRASP2Q96D09 838 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 UBL7Q96S82 380 aaPredicted RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 SENP7Q9BQF6 1050 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
CDH8-213ENST00000584966 KCNH7Q9NS40 1196 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 ZDHHC9Q9Y397 364 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 Q9Y3F1 56 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 SYNRGQ9UMZ2 1314 aa6.39□□□□□ -1.39
CDH8-213ENST00000584966 TGFBR3LH3BV60 316 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MSH4O15457 936 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MAFGO15525 162 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 DYNC1LI2O43237 492 aaPredicted RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 FIBPO43427 364 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 SLC37A4O43826 429 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 SORBS3O60504 671 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MSCO60682 206 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 TDP2O95551 362 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 PGK1P00558 417 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 TXNP10599 105 aaKnown RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 COL6A1P12109 1028 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 HOXD8P13378 290 aaPredicted RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 UBA1P22314 1058 aaKnown RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 PKP1Q13835 747 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 TRIM29Q14134 588 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 TTLL4Q14679 1199 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 NONOQ15233 471 aaKnown RBP eCLIP6.38□□□□□ -1.39
CDH8-213ENST00000584966 LRRC41Q15345 812 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 CELF3Q5SZQ8 465 aaKnown RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 IER5Q5VY09 327 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MOXD1Q6UVY6 613 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 B3GNT9Q6UX72 402 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 NEK8Q86SG6 692 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 NOSTRINQ8IVI9 506 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 ETNPPLQ8TBG4 499 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 GPR152Q8TDT2 470 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 HAS1Q92839 578 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 GJA10Q969M2 543 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 KCNMB3Q9NPA1 279 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 DMGDHQ9UI17 866 aaKnown RBP6.38□□□□□ -1.39
CDH8-213ENST00000584966 SIP14410 1827 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 MYH11P35749 1972 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 PDE4DIPQ5VU43 2346 aa6.38□□□□□ -1.39
CDH8-213ENST00000584966 CEP290O15078 2479 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 SCN5AQ14524 2016 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 GRIN2DO15399 1336 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 NFASCO94856 1347 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 CCDC194A0A1B0GVG4 234 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 GSTTP1A0A1W2PQM5 241 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 PRR19A6NJB7 356 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 NKRFO15226 690 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDH8-213ENST00000584966 STX6O43752 255 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 PSMD10O75832 226 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 MICAL2O94851 1124 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 FARP2O94887 1054 aaPredicted RBP6.37□□□□□ -1.39
CDH8-213ENST00000584966 GGPS1O95749 300 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 CCNE2O96020 404 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 TFRCP02786 760 aaKnown RBP6.37□□□□□ -1.39
CDH8-213ENST00000584966 RARBP10826 455 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 PCSK2P16519 638 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 CST5P28325 142 aaPredicted RBP6.37□□□□□ -1.39
CDH8-213ENST00000584966 GNA15P30679 374 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 BEX3Q00994 111 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 RESTQ13127 1097 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 PSMD2Q13200 908 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms