RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 WRAP73Q9P2S5 460 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-219ENST00000584717 CYP46A1Q9Y6A2 500 aa18.56■□□□□ 0.56
CCDC57-219ENST00000584717 VPS13AQ96RL7 3174 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 PLXNA3P51805 1871 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 GALR2O43603 387 aaPredicted RBP18.55■□□□□ 0.56
CCDC57-219ENST00000584717 DDHD2O94830 711 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 PPP2R5CQ13362 524 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 GALNT17Q6IS24 598 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 CPLX2Q6PUV4 134 aaKnown RBP18.55■□□□□ 0.56
CCDC57-219ENST00000584717 PRPF31Q8WWY3 499 aaKnown RBP18.55■□□□□ 0.56
CCDC57-219ENST00000584717 ZNF274Q96GC6 653 aaPredicted RBP18.55■□□□□ 0.56
CCDC57-219ENST00000584717 IRF2BPLQ9H1B7 796 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 SFXN1Q9H9B4 322 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 RSAD1Q9HA92 442 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 KCNMB3Q9NPA1 279 aa18.55■□□□□ 0.56
CCDC57-219ENST00000584717 C2orf16Q68DN1 1984 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 CCDC194A0A1B0GVG4 234 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 DTNBO60941 627 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 POMCP01189 267 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 KLRC2P26717 231 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 LAMTOR4Q0VGL1 99 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 UBXN11Q5T124 520 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 MRPL10Q7Z7H8 261 aaKnown RBP18.54■□□□□ 0.56
CCDC57-219ENST00000584717 PPFIBP1Q86W92 1011 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 PLCD3Q8N3E9 789 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 PSPC1Q8WXF1 523 aaKnown RBP18.54■□□□□ 0.56
CCDC57-219ENST00000584717 KLHL5Q96PQ7 755 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 EMILIN2Q9BXX0 1053 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 DHX33Q9H6R0 707 aaKnown RBP18.54■□□□□ 0.56
CCDC57-219ENST00000584717 USTQ9Y2C2 406 aa18.54■□□□□ 0.56
CCDC57-219ENST00000584717 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC57-219ENST00000584717 P4HBP07237 508 aaKnown RBP18.53■□□□□ 0.56
CCDC57-219ENST00000584717 CNPP09543 421 aaKnown RBP18.53■□□□□ 0.56
CCDC57-219ENST00000584717 HOXA11P31270 313 aaPredicted RBP18.53■□□□□ 0.56
CCDC57-219ENST00000584717 CLCN4P51793 760 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 NUBP1P53384 320 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 CCDC149Q6ZUS6 474 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 SRGAP1Q7Z6B7 1085 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 NEK8Q86SG6 692 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 GPR149Q86SP6 731 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 FAM20AQ96MK3 541 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
CCDC57-219ENST00000584717 LXNQ9BS40 222 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 PHF20Q9BVI0 1012 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 MFSD1Q9H3U5 465 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 GJB4Q9NTQ9 266 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 FAN1Q9Y2M0 1017 aa18.53■□□□□ 0.56
CCDC57-219ENST00000584717 CNTNAP2Q9UHC6 1331 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 C2CD2LO14523 706 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 NRP1O14786 923 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.56
CCDC57-219ENST00000584717 RFC5P40937 340 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 EMC2Q15006 297 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 ASTLQ6HA08 431 aaPredicted RBP18.52■□□□□ 0.56
CCDC57-219ENST00000584717 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.56
CCDC57-219ENST00000584717 TMEM175Q9BSA9 504 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 RGL1Q9NZL6 768 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 PRG3Q9Y2Y8 225 aaPredicted RBP18.52■□□□□ 0.56
CCDC57-219ENST00000584717 WDR87Q6ZQQ6 2873 aa18.52■□□□□ 0.56
CCDC57-219ENST00000584717 MARCH6O60337 910 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 LILRB3O75022 631 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 ALDH2P05091 517 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 GCFC2P16383 781 aaKnown RBP18.51■□□□□ 0.55
CCDC57-219ENST00000584717 YWHABP31946 246 aaKnown RBP18.51■□□□□ 0.55
CCDC57-219ENST00000584717 CYP4A11Q02928 519 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 XKR9Q5GH70 373 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 EXOC8Q8IYI6 725 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 RNF149Q8NC42 400 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 FLCNQ8NFG4 579 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 OXER1Q8TDS5 423 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 HAS1Q92839 578 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 ACSF2Q96CM8 615 aaPredicted RBP18.51■□□□□ 0.55
CCDC57-219ENST00000584717 DYDC2Q96IM9 177 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 MRPL17Q9NRX2 175 aaKnown RBP18.51■□□□□ 0.55
CCDC57-219ENST00000584717 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 MARCH5Q9NX47 278 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 KANSL3Q9P2N6 904 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 PPME1Q9Y570 386 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 SPTBN4Q9H254 2564 aa18.51■□□□□ 0.55
CCDC57-219ENST00000584717 ZBTB39O15060 712 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 ERLIN2O94905 339 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 URODP06132 367 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 MYBP10242 640 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 ITGA4P13612 1032 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 NCLP19338 710 aaKnown RBP18.5■□□□□ 0.55
CCDC57-219ENST00000584717 OR1G1P47890 313 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 AK2P54819 239 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 SCRN1Q12765 414 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 CTTNQ14247 550 aaKnown RBP18.5■□□□□ 0.55
CCDC57-219ENST00000584717 EPHA7Q15375 998 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 TAS1R1Q7RTX1 841 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 FERMT3Q86UX7 667 aa18.5■□□□□ 0.55
CCDC57-219ENST00000584717 C4orf19Q8IY42 314 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms