RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 USO1O60763 962 aaKnown RBP27.57■■■□□ 2
TSEN54-209ENST00000583454 EYA4O95677 639 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 CYP11B2P19099 503 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 UBA7P41226 1012 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 KCNK18Q7Z418 384 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 CABP7Q86V35 215 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 COLGALT1Q8NBJ5 622 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 MCPH1Q8NEM0 835 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 FDXACB1Q9BRP7 624 aaPredicted RBP27.57■■■□□ 2
TSEN54-209ENST00000583454 GCOM2Q9BZD3 368 aaPredicted RBP27.57■■■□□ 2
TSEN54-209ENST00000583454 NT5C3AQ9H0P0 336 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 RNF216Q9NWF9 866 aaPredicted RBP27.57■■■□□ 2
TSEN54-209ENST00000583454 CD207Q9UJ71 328 aa27.57■■■□□ 2
TSEN54-209ENST00000583454 E9PMD0 336 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 NRIP1P48552 1158 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 UBE3AQ05086 875 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 MXD4Q14582 209 aaPredicted RBP27.56■■■□□ 2
TSEN54-209ENST00000583454 TMEM119Q4V9L6 283 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 ATL3Q6DD88 541 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 LRRC55Q6ZSA7 311 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 SCLT1Q96NL6 688 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 CSRNP2Q9H175 543 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 IFT122Q9HBG6 1241 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 ARIH1Q9Y4X5 557 aaPredicted RBP27.56■■■□□ 2
TSEN54-209ENST00000583454 PCDHB12Q9Y5F1 795 aa27.56■■■□□ 2
TSEN54-209ENST00000583454 FGF18O76093 207 aa27.55■■■□□ 2
TSEN54-209ENST00000583454 ALADP13716 330 aa27.55■■■□□ 2
TSEN54-209ENST00000583454 PPP2R3CQ969Q6 453 aa27.55■■■□□ 2
TSEN54-209ENST00000583454 CASD1Q96PB1 797 aa27.55■■■□□ 2
TSEN54-209ENST00000583454 PRR33A8MZF0 331 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 DCXO43602 365 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 YEATS4O95619 227 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 NDUFV1P49821 464 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 ERVFC1P60507 584 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 POU5F1BQ06416 359 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 STK38Q15208 465 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 ZRSR1Q15695 479 aaKnown RBP27.54■■■□□ 2
TSEN54-209ENST00000583454 ZNF318Q5VUA4 2279 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 RBM23Q86U06 439 aaKnown RBP27.54■■■□□ 2
TSEN54-209ENST00000583454 KRI1Q8N9T8 703 aaKnown RBP27.54■■■□□ 2
TSEN54-209ENST00000583454 SMRP1Q8NCR6 262 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 NLRP4Q96MN2 994 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 CLIC6Q96NY7 704 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 INO80BQ9C086 356 aaPredicted RBP27.54■■■□□ 2
TSEN54-209ENST00000583454 CCSER1Q9C0I3 900 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 TMEM117Q9H0C3 514 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 AAASQ9NRG9 546 aa27.54■■■□□ 2
TSEN54-209ENST00000583454 FSCN2O14926 492 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 SRGAP2CP0DJJ0 459 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 GLRA2P23416 452 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 COASYQ13057 564 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 SPOUT1Q5T280 376 aaKnown RBP27.53■■■□□ 2
TSEN54-209ENST00000583454 USP49Q70CQ1 688 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 ECHDC2Q86YB7 292 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 VN1R2Q8NFZ6 395 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 ASAP3Q8TDY4 903 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 CALML4Q96GE6 196 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 CDK5RAP3Q96JB5 506 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 GPRC5CQ9NQ84 441 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 TLR9Q9NR96 1032 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 BARX2Q9UMQ3 279 aaPredicted RBP27.53■■■□□ 2
TSEN54-209ENST00000583454 HCN4Q9Y3Q4 1203 aa27.53■■■□□ 2
TSEN54-209ENST00000583454 TECTAO75443 2155 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 SPTLC2O15270 562 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 PPP6R2O75170 966 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 CSDE1O75534 798 aaKnown RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 ATF7P17544 494 aaPredicted RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 FGFR4P22455 802 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 RBM10P98175 930 aaKnown RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 FOXD4L6Q3SYB3 417 aaPredicted RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 FOXD4L3Q6VB84 417 aaPredicted RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 SRGAP1Q7Z6B7 1085 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 ZNF598Q86UK7 904 aaKnown RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 RNF149Q8NC42 400 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 FAM122AQ96E09 287 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 EPSTI1Q96J88 318 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 PLIN2Q99541 437 aa27.52■■■□□ 2
TSEN54-209ENST00000583454 POLR3FQ9H1D9 316 aaPredicted RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 DAXXQ9UER7 740 aaPredicted RBP27.52■■■□□ 2
TSEN54-209ENST00000583454 LAG3P18627 525 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 PTENP60484 403 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 CSPP1Q1MSJ5 1256 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 CLLU1OSQ5K130 101 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 SPECC1Q5M775 1068 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 MAEAQ7L5Y9 396 aa27.51■■□□□ 1.99
TSEN54-209ENST00000583454 IFNLR1Q8IU57 520 aaPredicted RBP27.51■■□□□ 1.99
TSEN54-209ENST00000583454 SYT2Q8N9I0 419 aaPredicted RBP27.51■■□□□ 1.99
TSEN54-209ENST00000583454 PIEZO1Q92508 2521 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 PER2O15055 1255 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 SFPQP23246 707 aaKnown RBP eCLIP27.5■■□□□ 1.99
TSEN54-209ENST00000583454 DDIT3P35638 169 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 PLCB3Q01970 1234 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 DNM1Q05193 864 aaKnown RBP27.5■■□□□ 1.99
TSEN54-209ENST00000583454 CAPSQ13938 189 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 TFDP1Q14186 410 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 DUSP6Q16828 381 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 RINT1Q6NUQ1 792 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 C1orf186Q6ZWK4 172 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 THNSL1Q8IYQ7 743 aa27.5■■□□□ 1.99
TSEN54-209ENST00000583454 LRRC15Q8TF66 581 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms