RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 NCOA5Q9HCD5 579 aaKnown RBP8.31□□□□□ -1.08
NF1-222ENST00000582892 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
NF1-222ENST00000582892 KCND1Q9NSA2 647 aa8.31□□□□□ -1.08
NF1-222ENST00000582892 ORC3Q9UBD5 711 aaPredicted RBP8.31□□□□□ -1.08
NF1-222ENST00000582892 SYNPO2Q9UMS6 1093 aa8.31□□□□□ -1.08
NF1-222ENST00000582892 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
NF1-222ENST00000582892 COL4A3Q01955 1670 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 UQCRHLA0A096LP55 91 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 C17orf102A2RUQ5 167 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 PATL2C9JE40 543 aaKnown RBP8.3□□□□□ -1.08
NF1-222ENST00000582892 GOLGA6L19H0YKK7 550 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 ENPP3O14638 875 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SPTLC2O15270 562 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 PPP6R2O75170 966 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 CHRNA1P02708 482 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 UQCRHP07919 91 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SMIM10L2AP0DMW4 78 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SMIM10L2BP0DMW5 78 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 HOXD8P13378 290 aaPredicted RBP8.3□□□□□ -1.08
NF1-222ENST00000582892 EIF2AK2P19525 551 aaKnown RBP8.3□□□□□ -1.08
NF1-222ENST00000582892 IBSPP21815 317 aaPredicted RBP8.3□□□□□ -1.08
NF1-222ENST00000582892 CMA1P23946 247 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 TECP42680 631 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 ME1P48163 572 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 NT5C2P49902 561 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SP2Q02086 613 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 USP4Q13107 963 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 KCNC3Q14003 757 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 LPIN1Q14693 890 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SLC39A14Q15043 492 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 STK38Q15208 465 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 SYNE3Q6ZMZ3 975 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 TRIM50Q86XT4 487 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 TMTC2Q8N394 836 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 DTWD2Q8NBA8 298 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 DNERQ8NFT8 737 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 PPTC7Q8NI37 304 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 P2RX5Q93086 422 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 PLVAPQ9BX97 442 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 TRIM5Q9C035 493 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 KRT23Q9C075 422 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 KCNF1Q9H3M0 494 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 MFSD1Q9H3U5 465 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 RNPEPQ9H4A4 650 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 GOLPH3LQ9H4A5 285 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 TTC12Q9H892 705 aaPredicted RBP8.3□□□□□ -1.08
NF1-222ENST00000582892 SETD4Q9NVD3 440 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 PCDHA7Q9UN72 937 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 AKAP13Q12802 2813 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 LAMA5O15230 3695 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 ITPR1Q14643 2758 aa8.3□□□□□ -1.08
NF1-222ENST00000582892 MAST4O15021 2626 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
NF1-222ENST00000582892 AOC1P19801 751 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 U2AF2P26368 475 aaKnown RBP eCLIP8.29□□□□□ -1.08
NF1-222ENST00000582892 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
NF1-222ENST00000582892 CLCN5P51795 746 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 CBLBQ13191 982 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 DUSP6Q16828 381 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 GLIPR1L2Q4G1C9 344 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 ANKRD54Q6NXT1 300 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 BTNL9Q6UXG8 535 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 RTN4RL1Q86UN2 441 aaPredicted RBP8.29□□□□□ -1.08
NF1-222ENST00000582892 UBALD2Q8IYN6 164 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 SYTL5Q8TDW5 730 aaPredicted RBP8.29□□□□□ -1.08
NF1-222ENST00000582892 IGDCC4Q8TDY8 1250 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 PPP2R3CQ969Q6 453 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 NACAP1Q9BZK3 213 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 RNF41Q9H4P4 317 aaPredicted RBP8.29□□□□□ -1.08
NF1-222ENST00000582892 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 IMPACTQ9P2X3 320 aa8.29□□□□□ -1.08
NF1-222ENST00000582892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.29□□□□□ -1.08
NF1-222ENST00000582892 LOC400499M0QZD8 3231 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 CCDC196A0A1B0GTZ2 297 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 HIDE1A8MVS5 230 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 SPINT1O43278 529 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 LILRA1O75019 489 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 GGPS1O95749 300 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 APPP05067 770 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 PCP11498 1178 aaKnown RBP8.28□□□□□ -1.08
NF1-222ENST00000582892 IFNAR1P17181 557 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 ATXN1P54253 815 aaKnown RBP8.28□□□□□ -1.08
NF1-222ENST00000582892 GSDMDP57764 484 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 HAND2P61296 217 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 TPM4P67936 248 aa8.28□□□□□ -1.08
NF1-222ENST00000582892 SART3Q15020 963 aaKnown RBP8.28□□□□□ -1.08
NF1-222ENST00000582892 SYCP1Q15431 976 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms