RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 LEKR1Q6ZMV7 388 aa10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 SLITRK6Q9H5Y7 841 aa10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 TOPORSQ9NS56 1045 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 RGL1Q9NZL6 768 aa10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 SIK3Q9Y2K2 1263 aa10.94□□□□□ -0.66
TRAPPC8-211ENST00000582539 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RTN2O75298 545 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 MTERF2Q49AM1 385 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RUSC1Q9BVN2 902 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 FRMD8P1Q9BZ68 369 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RPF1Q9H9Y2 349 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RBAK-RBAKDNI3L0D1 243 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 PGRMC1O00264 195 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 EMBQ6PCB8 327 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 ZNF410Q86VK4 478 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 WHAMMQ8TF30 809 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 U2AF1L4Q8WU68 220 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 HNRNPLLQ8WVV9 542 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 NTPCRQ9BSD7 190 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 ELP3Q9H9T3 547 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 FBXO28Q9NVF7 368 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 CTTNBP2NLQ9P2B4 639 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 NFIBO00712 420 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 CLDN3O15551 220 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 AP5Z1O43299 807 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 ATICP31939 592 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 SNAP25P60880 206 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 GPC5P78333 572 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 IQSEC1Q6DN90 963 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RUFY4Q6ZNE9 571 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 VCPIP1Q96JH7 1222 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 TRIM62Q9BVG3 475 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 VIPAS39Q9H9C1 493 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 RGS17Q9UGC6 210 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 AGO2Q9UKV8 859 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 UTP11Q9Y3A2 253 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 ARFGEF1Q9Y6D6 1849 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 NSFP46459 744 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 FXR1P51114 621 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 GCNT1Q02742 428 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 MYO1EQ12965 1108 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 HADHQ16836 314 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 PAPD7Q5XG87 772 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 EFCAB13Q8IY85 973 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 LENG9Q96B70 501 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 FOXP3Q9BZS1 431 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
TRAPPC8-211ENST00000582539 MACROD2A1Z1Q3 448 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 SMIM22K7EJ46 135 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 KRT5P13647 590 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 CAV1Q03135 178 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 GBA2Q9HCG7 927 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 A1CFQ9NQ94 594 aaKnown RBP10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 PIGRP01833 764 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 VGLL4Q14135 290 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 USP20Q9Y2K6 914 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 FAM187AA6NFU0 413 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 SMAPO00193 183 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 SART1O43290 800 aaKnown RBP10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 GAS8O95995 478 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 CASP1P29466 404 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 EPHB4P54760 987 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 MFSD14CQ5VZR4 134 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 PLEKHH3Q7Z736 793 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 DOCK1Q14185 1865 aa10.92□□□□□ -0.66
TRAPPC8-211ENST00000582539 SPOPO43791 374 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 CPT1AP50416 773 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 UBXN2AP68543 259 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 RAD51AP2Q09MP3 1159 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SPATA33Q96N06 139 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 CYP3A43Q9HB55 503 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SUCLA2Q9P2R7 463 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 ZNF541Q9H0D2 1346 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 USP2O75604 605 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 LSM8O95777 96 aaKnown RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 MYBP10242 640 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SKIP12755 728 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 PSMD6Q15008 389 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SNRNP35Q16560 246 aaKnown RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SGSM1Q2NKQ1 1148 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 ALS2CLQ60I27 953 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 TOGARAM2Q6ZUX3 1019 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 CGRRF1Q99675 332 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 PODXLO00592 558 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 IVLP07476 585 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms