RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 SSBP05455 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 RETP07949 1114 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 SFPQP23246 707 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 ZNF76P36508 570 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 PHKA2P46019 1235 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 RPS9P46781 194 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 SLC11A1P49279 550 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 CLCN3P51790 818 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 AK2P54819 239 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 FOXK1P85037 733 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 SHC2P98077 582 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 ITGB3BPQ13352 177 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 UBE2SQ16763 222 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 TWF2Q6IBS0 349 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 GET4Q7L5D6 327 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 NCOA7Q8NI08 942 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 RPS6KC1Q96S38 1066 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 GCOM2Q9BZD3 368 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 LY9Q9HBG7 655 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 INPP5FQ9Y2H2 1132 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 FAN1Q9Y2M0 1017 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 MAFBQ9Y5Q3 323 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 CFAP47Q6ZTR5 3102 aa9.9□□□□□ -0.82
CDK5RAP3-224ENST00000582275 MYH9P35579 1960 aaKnown RBP9.9□□□□□ -0.83
CDK5RAP3-224ENST00000582275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ZNF623O75123 536 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CCNE2O96020 404 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PSAPP07602 524 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 HOXB3P14651 431 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GPC3P51654 580 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GPC5P78333 572 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CREMQ03060 361 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 SLC44A4Q53GD3 710 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ZNF746Q6NUN9 644 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GPR65Q8IYL9 337 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 TMTC2Q8N394 836 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 FEZF2Q8TBJ5 459 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 BCL7CQ8WUZ0 217 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CLDN23Q96B33 292 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 MYL10Q9BUA6 226 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 HERC2P3Q9BVR0 1158 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 VN1R3Q9BXE9 311 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 LTB4R2Q9NPC1 389 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PRMT8Q9NR22 394 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 NRBP2Q9NSY0 501 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 TBC1D22BQ9NU19 505 aa9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 FASNP49327 2511 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CNTNAP2Q9UHC6 1331 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 TEX28O15482 410 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 LRRN2O75325 713 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 OFD1O75665 1012 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CALM1P0DP23 149 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CALM2P0DP24 149 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CALM3P0DP25 149 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ATP4AP20648 1035 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 FSHRP23945 695 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PMLP29590 882 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GLUD2P49448 558 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 DSG2Q14126 1118 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 IL31Q6EBC2 164 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ZNF654Q8IZM8 581 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 LINC01465Q8N7H1 131 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ZNF707Q96C28 371 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 MTA3Q9BTC8 594 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PRKD2Q9BZL6 878 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 RXFP1Q9HBX9 757 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PARD6AQ9NPB6 346 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 DNAJB4Q9UDY4 337 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CDH7Q9ULB5 785 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PCDHA10Q9Y5I2 948 aa9.88□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PATJQ8NI35 1801 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 FRYLO94915 3013 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 IPO5O00410 1097 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 C2CD2LO14523 706 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 GAS2O43903 313 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 NR1I2O75469 434 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 RFPL2O75678 378 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PROS1P07225 676 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 SREBF1P36956 1147 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 DNM2P50570 870 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 CSRP2Q16527 193 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 ZNF852Q6ZMS4 543 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 PRR23CQ6ZRP0 262 aa9.87□□□□□ -0.83
CDK5RAP3-224ENST00000582275 HEATR3Q7Z4Q2 680 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms