RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 DZANK1Q9NVP4 752 aa16.07■□□□□ 0.16
CCDC57-214ENST00000582040 NR2E1Q9Y466 385 aa16.07■□□□□ 0.16
CCDC57-214ENST00000582040 IRAK3Q9Y616 596 aa16.07■□□□□ 0.16
CCDC57-214ENST00000582040 WDFY4Q6ZS81 3184 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 CNTNAP2Q9UHC6 1331 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
CCDC57-214ENST00000582040 WEE2P0C1S8 567 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 EPCAMP16422 314 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 KRT2P35908 639 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 UBXN11Q5T124 520 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 OTUD6AQ7L8S5 288 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 ZNF280BQ86YH2 543 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 C12orf76Q8N812 135 aaPredicted RBP16.06■□□□□ 0.16
CCDC57-214ENST00000582040 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 WASF1Q92558 559 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 ASIC4Q96FT7 647 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
CCDC57-214ENST00000582040 ZBTB39O15060 712 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 DDHD2O94830 711 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 ERLIN2O94905 339 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 BAG4O95429 457 aaKnown RBP16.05■□□□□ 0.16
CCDC57-214ENST00000582040 LARGE1O95461 756 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 FDPSP14324 419 aaKnown RBP16.05■□□□□ 0.16
CCDC57-214ENST00000582040 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
CCDC57-214ENST00000582040 MTHFRP42898 656 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 AFF1P51825 1210 aaKnown RBP16.05■□□□□ 0.16
CCDC57-214ENST00000582040 ANAPC15P60006 121 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 GIT2Q14161 759 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 IER5LQ5T953 404 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
CCDC57-214ENST00000582040 FERMT3Q86UX7 667 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 SLFN12Q8IYM2 578 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 NECAB1Q8N987 351 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 TNFRSF25Q93038 417 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 RIPOR3Q96MK2 946 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 MTRQ99707 1265 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 DENND4AQ7Z401 1863 aa16.05■□□□□ 0.16
CCDC57-214ENST00000582040 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC57-214ENST00000582040 NEFLP07196 543 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 FOSBP53539 338 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 VCPP55072 806 aaKnown RBP16.04■□□□□ 0.16
CCDC57-214ENST00000582040 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 SLC22A17Q8WUG5 538 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
CCDC57-214ENST00000582040 EIF2AK1Q9BQI3 630 aaKnown RBP16.04■□□□□ 0.16
CCDC57-214ENST00000582040 ASAP2O43150 1006 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 TSPAN1O60635 241 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 PDGFBP01127 241 aaPredicted RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 POMCP01189 267 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 PTPN5P54829 565 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 CALCRLQ16602 461 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 ME3Q16798 604 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 TDRD5Q8NAT2 981 aaKnown RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 KREMEN2Q8NCW0 462 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 EIF2AQ9BY44 585 aaKnown RBP16.03■□□□□ 0.16
CCDC57-214ENST00000582040 IPPQ9Y573 584 aa16.03■□□□□ 0.16
CCDC57-214ENST00000582040 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 INO80B-WBP1J3KQ70 363 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 WNT7AO00755 349 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 SLITRK3O94933 977 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 ITGA4P13612 1032 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 PTENP60484 403 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 MTMR3Q13615 1198 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 CAPSQ13938 189 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 CABP7Q86V35 215 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
CCDC57-214ENST00000582040 CPB2Q96IY4 423 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 KANSL3Q9P2N6 904 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
CCDC57-214ENST00000582040 SORCS3Q9UPU3 1222 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 FAN1Q9Y2M0 1017 aa16.02■□□□□ 0.16
CCDC57-214ENST00000582040 PRG3Q9Y2Y8 225 aaPredicted RBP16.02■□□□□ 0.16
CCDC57-214ENST00000582040 NRP1O14786 923 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 NEMFO60524 1076 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 JAK2O60674 1132 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 LYPLA2O95372 231 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 BRD1O95696 1058 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 URODP06132 367 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 ASGR2P07307 311 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 MLH1P40692 756 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 TCF15Q12870 199 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 TFDP1Q14186 410 aa16.01■□□□□ 0.15
CCDC57-214ENST00000582040 MXD4Q14582 209 aaPredicted RBP16.01■□□□□ 0.15
CCDC57-214ENST00000582040 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms