RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 UBE3CQ15386 1083 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 GAGE13Q4V321 117 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 TCTN3Q6NUS6 607 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 PNMA8AQ86V59 439 aaPredicted RBP5.92□□□□□ -1.46
NF1-220ENST00000581113 GPR135Q8IZ08 494 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 MSL3Q8N5Y2 521 aaKnown RBP5.92□□□□□ -1.46
NF1-220ENST00000581113 GLB1L3Q8NCI6 653 aaPredicted RBP5.92□□□□□ -1.46
NF1-220ENST00000581113 STAG1Q8WVM7 1258 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 TMEM176AQ96HP8 235 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 CEP89Q96ST8 783 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 GPHA2Q96T91 129 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 RCAN3Q9UKA8 241 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 ZBTB21Q9ULJ3 1066 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 MRFAP1Q9Y605 127 aa5.92□□□□□ -1.46
NF1-220ENST00000581113 TNKSO95271 1327 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 K7ESM1 405 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 TMEM127O75204 238 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 PDGFRBP09619 1106 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 LTA4HP09960 611 aaKnown RBP5.91□□□□□ -1.46
NF1-220ENST00000581113 SYN1P17600 705 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 AGXTP21549 392 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 PCBP2Q15366 365 aaKnown RBP eCLIP5.91□□□□□ -1.46
NF1-220ENST00000581113 ADRM1Q16186 407 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
NF1-220ENST00000581113 FATE1Q969F0 183 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 RBM15Q96T37 977 aaKnown RBP eCLIP5.91□□□□□ -1.46
NF1-220ENST00000581113 SSBP3Q9BWW4 388 aaPredicted RBP5.91□□□□□ -1.46
NF1-220ENST00000581113 TLR9Q9NR96 1032 aa5.91□□□□□ -1.46
NF1-220ENST00000581113 TYW1Q9NV66 732 aaKnown RBP5.91□□□□□ -1.46
NF1-220ENST00000581113 ZFR2Q9UPR6 939 aaKnown RBP5.91□□□□□ -1.46
NF1-220ENST00000581113 UBE2QL1A1L167 161 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 KLHL33A6NCF5 533 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 BTBD11A6QL63 1104 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 FOXS1O43638 330 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 RBP3P10745 1247 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 CCND1P24385 295 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 CTSSP25774 331 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.46
NF1-220ENST00000581113 ADAM8P78325 824 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 MEF2AQ02078 507 aaPredicted RBP5.9□□□□□ -1.46
NF1-220ENST00000581113 MUM1L1Q5H9M0 696 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 BTNL9Q6UXG8 535 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 ABHD15Q6UXT9 468 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 TAS1R1Q7RTX1 841 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 ANKRD13AQ8IZ07 590 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 FUKQ8N0W3 1084 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 PPM1NQ8N819 430 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 PAWRQ96IZ0 340 aaKnown RBP5.9□□□□□ -1.46
NF1-220ENST00000581113 LOXL4Q96JB6 756 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.46
NF1-220ENST00000581113 IL23AQ9NPF7 189 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 PCDHGA2Q9Y5H1 932 aa5.9□□□□□ -1.46
NF1-220ENST00000581113 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.47
NF1-220ENST00000581113 PMS2P1A4D2B8 440 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 FZD9O00144 591 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 MTSS1O43312 755 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA12O60330 932 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 MALLQ13021 153 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 DUSP8Q13202 625 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 GRM7Q14831 915 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 ANO4Q32M45 955 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 ADGRE4PQ86SQ3 457 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 RIN2Q8WYP3 895 aaPredicted RBP5.9□□□□□ -1.47
NF1-220ENST00000581113 JADE3Q92613 823 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 NELFAQ9H3P2 528 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 MSL2Q9HCI7 577 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 ZNF277Q9NRM2 450 aaPredicted RBP5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA9Q9Y5G4 932 aaKnown RBP5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA8Q9Y5G5 932 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA7Q9Y5G6 932 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA6Q9Y5G7 932 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 PCDHGA3Q9Y5H0 932 aa5.9□□□□□ -1.47
NF1-220ENST00000581113 RPTORQ8N122 1335 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 NRP1O14786 923 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 AKR1B10O60218 316 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 RAD17O75943 681 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 NPEPPSP55786 919 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 DUSP2Q05923 314 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 CMTM4Q8IZR5 234 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 OR5M3Q8NGP4 307 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 SNX33Q8WV41 574 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 ARL8AQ96BM9 186 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 TCF25Q9BQ70 676 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 ADI1Q9BV57 179 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 GREM2Q9H772 168 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 ST6GALNAC2Q9UJ37 374 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 DNM3Q9UQ16 869 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
NF1-220ENST00000581113 PATE3B3GLJ2 98 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 PPM1GO15355 546 aaPredicted RBP5.88□□□□□ -1.47
NF1-220ENST00000581113 ALDH1L1O75891 902 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 ADSLP30566 484 aaPredicted RBP5.88□□□□□ -1.47
NF1-220ENST00000581113 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
NF1-220ENST00000581113 CASRP41180 1078 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 WNT3AP56704 352 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 ICAM4Q14773 271 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 FAM180AQ6UWF9 173 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms