RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 PTENP60484 403 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 ADAM17P78536 824 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 UBXN1Q04323 297 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
SKA2-206ENST00000581068 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 FKBP15Q5T1M5 1219 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
SKA2-206ENST00000581068 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
SKA2-206ENST00000581068 TRIM59Q8IWR1 403 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 KIAA0319LQ8IZA0 1049 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 NLRP4Q96MN2 994 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
SKA2-206ENST00000581068 NFKBIZQ9BYH8 718 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 PCIF1Q9H4Z3 704 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 HSPBP1Q9NZL4 362 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 HDAC6Q9UBN7 1215 aa12.08□□□□□ -0.48
SKA2-206ENST00000581068 ARMCX3Q9UH62 379 aaPredicted RBP12.08□□□□□ -0.48
SKA2-206ENST00000581068 HNRNPDLO14979 420 aaKnown RBP12.07□□□□□ -0.48
SKA2-206ENST00000581068 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
SKA2-206ENST00000581068 MAPK13O15264 365 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 AKAP3O75969 853 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 VTNP04004 478 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 PRKCBP05771 671 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 ASGR1P07306 291 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 GJB1P08034 283 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 HOXC8P31273 242 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 CASP4P49662 377 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 MAPK6Q16659 721 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 MIIPQ5JXC2 388 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 LHX8Q68G74 356 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 ZNF410Q86VK4 478 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 NME8Q8N427 588 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 XXYLT1Q8NBI6 393 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 ARRDC4Q8NCT1 418 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
SKA2-206ENST00000581068 MRPL4Q9BYD3 311 aaKnown RBP12.07□□□□□ -0.48
SKA2-206ENST00000581068 NDST4Q9H3R1 872 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.07□□□□□ -0.48
SKA2-206ENST00000581068 STYXL1Q9Y6J8 313 aa12.07□□□□□ -0.48
SKA2-206ENST00000581068 A0A087WZ62 844 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 A0A1W2PQC6 194 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 TISP43B9A030 160 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 ACKR2O00590 384 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 KRT13P13646 458 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 PBX1P40424 430 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 GPC3P51654 580 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 NLRP11P59045 1033 aaKnown RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 HIC1Q14526 733 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 SPECC1LQ69YQ0 1117 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 SLC39A4Q6P5W5 647 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 SESTD1Q86VW0 696 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 SH3TC2Q8TF17 1288 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 PPP1R13LQ8WUF5 828 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 POMGNT1Q8WZA1 660 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 BORCS6Q96GS4 357 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 FDXACB1Q9BRP7 624 aaPredicted RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 CBWD1Q9BRT8 395 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.48
SKA2-206ENST00000581068 FAM49AQ9H0Q0 323 aaPredicted RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 FZD8Q9H461 694 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 KIAA1586Q9HCI6 787 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 PRMT7Q9NVM4 692 aaPredicted RBP12.06□□□□□ -0.48
SKA2-206ENST00000581068 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
SKA2-206ENST00000581068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.06□□□□□ -0.48
SKA2-206ENST00000581068 MOXD2PA6NHM9 499 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 TREHO43280 583 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 LDHAP00338 332 aaKnown RBP12.05□□□□□ -0.48
SKA2-206ENST00000581068 ADSSP30520 456 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 MATR3P43243 847 aaKnown RBP eCLIP12.05□□□□□ -0.48
SKA2-206ENST00000581068 ACLYP53396 1101 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 GSDMDP57764 484 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 ZNF200P98182 395 aaPredicted RBP12.05□□□□□ -0.48
SKA2-206ENST00000581068 MBTD1Q05BQ5 628 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 PTPN11Q06124 597 aaPredicted RBP12.05□□□□□ -0.48
SKA2-206ENST00000581068 FAM187BQ17R55 369 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 HS1BP3Q53T59 392 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 FAM47CQ5HY64 1035 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 RUFY4Q6ZNE9 571 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 CCDC186Q7Z3E2 898 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 DNAJB3Q8WWF6 145 aa12.05□□□□□ -0.48
SKA2-206ENST00000581068 VTI1AQ96AJ9 217 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms