RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 GTF2IRD2BQ6EKJ0 949 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 GTF2IRD2Q86UP8 949 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 MAFAQ8NHW3 353 aaPredicted RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 MICAL1Q8TDZ2 1067 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 PARK7Q99497 189 aaKnown RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 TTYH1Q9H313 450 aaPredicted RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 TNFRSF12AQ9NP84 129 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 PDLIM7Q9NR12 457 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 TCF20Q9UGU0 1960 aaKnown RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 ATRNL1Q5VV63 1379 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 RPAP1Q9BWH6 1393 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 AGRPO00253 132 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 IFIT5Q13325 482 aaKnown RBP7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 MAP3K21Q5TCX8 1036 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 BICRALQ6AI39 1079 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 MRM1Q6IN84 353 aaKnown RBP7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 LMBR1LQ6UX01 489 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 LDHAL6AQ6ZMR3 332 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 ANKRD13CQ8N6S4 541 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 USP38Q8NB14 1042 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 FAM151AQ8WW52 585 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 TEKT1Q969V4 418 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 MRGPRX3Q96LB0 322 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 TOX2Q96NM4 488 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 LGR4Q9BXB1 951 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 TRIM55Q9BYV6 548 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 LOC285556D6RIA3 1793 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 TRANK1O15050 2925 aa7.99□□□□□ -1.13
PPP4R1-216ENST00000580283 MED14OSP0DP75 135 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 TACR1P25103 407 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 PLA2G5P39877 138 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 GNAI1P63096 354 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 DLG4P78352 724 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 TCP10Q12799 353 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 DDR2Q16832 855 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 TREML2Q5T2D2 321 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 CDC42EP5Q6NZY7 148 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 GADL1Q6ZQY3 521 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 CPNE8Q86YQ8 564 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 CKAP2LQ8IYA6 745 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 BTN2A2Q8WVV5 523 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 TRIB2Q92519 343 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 EPN3Q9H201 632 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 CYP26B1Q9NR63 512 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 SLC45A1Q9Y2W3 748 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 ZHX2Q9Y6X8 837 aa7.98□□□□□ -1.13
PPP4R1-216ENST00000580283 HMGCRP04035 888 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 ITGAVP06756 1048 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 VIPR1P32241 457 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 YBX1P67809 324 aaKnown RBP7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 CHAF1AQ13111 956 aaPredicted RBP7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 NR1I3Q14994 352 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 SHHQ15465 462 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 C9orf50Q5SZB4 431 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 HHIPL2Q6UWX4 724 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 CABP7Q86V35 215 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 ZNF227Q86WZ6 799 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 CELF2-AS1Q8N7Q2 184 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 LINS1Q8NG48 757 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 COPS5Q92905 334 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 COA7Q96BR5 231 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 HOOK2Q96ED9 719 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 KAZALD1Q96I82 304 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 SGPP1Q9BX95 441 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 NKX2-4Q9H2Z4 354 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 GPRC5CQ9NQ84 441 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 CLEC1BQ9P126 229 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 KLHL14Q9P2G3 628 aa7.97□□□□□ -1.13
PPP4R1-216ENST00000580283 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.13
PPP4R1-216ENST00000580283 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 KLF4O43474 513 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 NPHS1O60500 1241 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 KRT1P04264 644 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 PLS3P13797 630 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 CACNB2Q08289 660 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 KCNA10Q16322 511 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 FASTKD5Q7L8L6 764 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 TMC6Q7Z403 805 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 LZTR1Q8N653 840 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 DNAAF4Q8WXU2 420 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 CNNM1Q9NRU3 951 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 SMG5Q9UPR3 1016 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 PLXNA1Q9UIW2 1896 aa7.96□□□□□ -1.14
PPP4R1-216ENST00000580283 APAF1O14727 1248 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 CYBBP04839 570 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 THBDP07204 575 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 SNRPB2P08579 225 aaKnown RBP7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 DBHP09172 617 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms