RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PDCD2LQ9BRP1 358 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF334Q9HCZ1 680 aaPredicted RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 CLEC18AA5D8T8 446 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 HNRNPA1P09651 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 ADSSP30520 456 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 NOVP48745 357 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 PMS2CLQ68D20 193 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 CLEC18BQ6UXF7 455 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 VSIG10LQ86VR7 867 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 HDDC3Q8N4P3 179 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 CAMKK1Q8N5S9 505 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 CLEC18CQ8NCF0 446 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 ITFG1Q8TB96 612 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 CHMP4CQ96CF2 233 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 MED8Q96G25 268 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 BRD9Q9H8M2 597 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 RBM12Q9NTZ6 932 aaKnown RBP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 COL6A6A6NMZ7 2263 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 ZC3H11AO75152 810 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 SSBP05455 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 URODP06132 367 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 LILRA6Q6PI73 481 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 GLRX5Q86SX6 157 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 FAM228AQ86W67 206 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 TMC8Q8IU68 726 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 PDCD7Q8N8D1 485 aaKnown RBP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 MEIS3Q99687 375 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 NUSAP1Q9BXS6 441 aaKnown RBP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
CCDC178-209ENST00000579947 ERAP1Q9NZ08 941 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 FREM2Q5SZK8 3169 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 ZMYM6O95789 1325 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 FRMPD4Q14CM0 1322 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 APC2O95996 2303 aa7.02□□□□□ -1.29
CCDC178-209ENST00000579947 EXTL3O43909 919 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 SOD2P04179 222 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 CD59P13987 128 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 ENGP17813 658 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 CCNE1P24864 410 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 MAPK8P45983 427 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 NTHL1P78549 312 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 MBOAT7Q96N66 472 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 PHF12Q96QT6 1004 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 KIF2CQ99661 725 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 NRDE2Q9H7Z3 1164 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 GDE1Q9NZC3 331 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 PCDHB15Q9Y5E8 787 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 ATG2BQ96BY7 2078 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 ABCA12Q86UK0 2595 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 PCNX2A6NKB5 2137 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 RRP8O43159 456 aaKnown RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 FCARP24071 287 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 HOXA9P31269 272 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 PXNP49023 591 aaPredicted RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 SLC11A1P49279 550 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 PGM5Q15124 567 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 STK11IPQ8N1F8 1099 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 TRMT61BQ9BVS5 477 aaKnown RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 C8orf33Q9H7E9 229 aaPredicted RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 NID2Q14112 1375 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 ASCC3Q8N3C0 2202 aaKnown RBP7.01□□□□□ -1.29
CCDC178-209ENST00000579947 C2CD3Q4AC94 2353 aa7.01□□□□□ -1.29
CCDC178-209ENST00000579947 TGM5O43548 720 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 GAS2O43903 313 aaKnown RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 PRDM1O75626 825 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 CCND2P30279 289 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 MAPK6Q16659 721 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 USH1GQ495M9 461 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 TANGO2Q6ICL3 276 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 CYFIP1Q7L576 1253 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 PRICKLE2Q7Z3G6 844 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 ZBTB10Q96DT7 871 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 DNAJC2Q99543 621 aaKnown RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 PCDH15Q96QU1 1955 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 URB1O60287 2271 aaKnown RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 NOTCH4Q99466 2003 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 A0A1B0GTL3 188 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 SPATA31C2B4DYI2 1134 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 ZNF862O60290 1169 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 OPHN1O60890 802 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 DKK1O94907 266 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 EFEMP2O95967 443 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 GNAI3P08754 354 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 SPATA31D3P0C874 917 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 RPL17P18621 184 aaKnown RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 ELAVL4P26378 380 aaKnown RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 DPP6P42658 865 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 HSD17B4P51659 736 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 TFAP4Q01664 338 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 SLC23A3Q6PIS1 610 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 SPATA31D4Q6ZUB0 917 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 GPR65Q8IYL9 337 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 RNF168Q8IYW5 571 aaPredicted RBP7□□□□□ -1.29
CCDC178-209ENST00000579947 PNPLA1Q8N8W4 532 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 TRIM4Q9C037 500 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 CDHR5Q9HBB8 845 aa7□□□□□ -1.29
CCDC178-209ENST00000579947 SLC8A2Q9UPR5 921 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms