RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 RAB23Q9ULC3 237 aa7.1□□□□□ -1.27
UBB-208ENST00000578706 ST3GAL5Q9UNP4 418 aa7.1□□□□□ -1.27
UBB-208ENST00000578706 ZDHHC9Q9Y397 364 aa7.1□□□□□ -1.27
UBB-208ENST00000578706 GPSM3Q9Y4H4 160 aa7.1□□□□□ -1.27
UBB-208ENST00000578706 PCDHA2Q9Y5H9 948 aa7.1□□□□□ -1.27
UBB-208ENST00000578706 NEDD4P46934 1319 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 APC2O95996 2303 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 CACNA1EQ15878 2313 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 CCDC195A0A1B0GUA6 201 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 ATP9AO75110 1047 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 RPS6KA5O75582 802 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 MYBP10242 640 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 RPS6KB1P23443 525 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 HOXC13P31276 330 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 MAGEA9P43362 315 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 BCAR1P56945 870 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 PKP1Q13835 747 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 SIM2Q14190 667 aaPredicted RBP7.09□□□□□ -1.27
UBB-208ENST00000578706 PLCB4Q15147 1175 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 AASDHQ4L235 1098 aaPredicted RBP7.09□□□□□ -1.27
UBB-208ENST00000578706 SLC44A4Q53GD3 710 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 ZBTB41Q5SVQ8 909 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 C19orf48Q6RUI8 117 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 GET4Q7L5D6 327 aaPredicted RBP7.09□□□□□ -1.27
UBB-208ENST00000578706 DDX53Q86TM3 631 aaKnown RBP7.09□□□□□ -1.27
UBB-208ENST00000578706 STAG2Q8N3U4 1231 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 ENAHQ8N8S7 591 aaPredicted RBP7.09□□□□□ -1.27
UBB-208ENST00000578706 UBAC1Q9BSL1 405 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 SCNM1Q9BWG6 230 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 AZI2Q9H6S1 392 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 MAN1C1Q9NR34 630 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 ZSWIM5Q9P217 1185 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 SMC3Q9UQE7 1217 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 GINS2Q9Y248 185 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 NOTCH4Q99466 2003 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 ASXL3Q9C0F0 2248 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 SPTA1P02549 2419 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 WDR81Q562E7 1941 aa7.09□□□□□ -1.27
UBB-208ENST00000578706 EML5Q05BV3 1969 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 BAZ2BQ9UIF8 2168 aaKnown RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 PNMA6FA0A0J9YX94 578 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 B4E1Z4 1266 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 GPR182O15218 404 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 INPPL1O15357 1258 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 HOXA2O43364 376 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 MBD3O95983 291 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 KCNA2P16389 499 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 POLGP54098 1239 aaPredicted RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 ZNF252P-AS1Q0IIN9 211 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 GIT2Q14161 759 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 SLC35G1Q2M3R5 365 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 IFIT1BQ5T764 474 aaKnown RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 PCNX4Q63HM2 1172 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 PPFIBP1Q86W92 1011 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 FAM160A2Q8N612 972 aaPredicted RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 SMARCC2Q8TAQ2 1214 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 HELQQ8TDG4 1101 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 STAMQ92783 540 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 CUL5Q93034 780 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 TMEM169Q96HH4 297 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 IGSF21Q96ID5 467 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 PIGSQ96S52 555 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 FAM217BQ9NTX9 383 aaPredicted RBP7.08□□□□□ -1.28
UBB-208ENST00000578706 LMBRD1Q9NUN5 540 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 MAD2L2Q9UI95 211 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 ATP6V1DQ9Y5K8 247 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 ACACAQ13085 2346 aa7.08□□□□□ -1.28
UBB-208ENST00000578706 PTPN13Q12923 2485 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 MAFGO15525 162 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 FOXD2O60548 495 aaPredicted RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 CYP21A2P08686 494 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 ZNF806P0C7X5 589 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 ZSCAN22P10073 491 aaPredicted RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 CPA1P15085 419 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 PDCP20941 246 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 NOVA1P51513 510 aaKnown RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 SATB1Q01826 763 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 GAS6Q14393 721 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 RSPO2Q6UXX9 243 aaPredicted RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 MAMSTRQ6ZN01 415 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 TPRG1Q6ZUI0 275 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 ECHDC2Q86YB7 292 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 KIAA0319LQ8IZA0 1049 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 SMG7Q92540 1137 aaKnown RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 PPP1R16BQ96T49 567 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 KRT23Q9C075 422 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 GZF1Q9H116 711 aaPredicted RBP7.07□□□□□ -1.28
UBB-208ENST00000578706 SMOC1Q9H4F8 434 aa7.07□□□□□ -1.28
UBB-208ENST00000578706 RIOX1Q9H6W3 641 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms