RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 TIPINQ9BVW5 301 aa7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 IFIH1Q9BYX4 1025 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 MTIF3Q9H2K0 278 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 AGO3Q9H9G7 860 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 STK17AQ9UEE5 414 aa7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 PADI3Q9ULW8 664 aa7.4□□□□□ -1.22
PPP4R1-207ENST00000578010 ABHD14A-ACY1A0A1B0GW23 586 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 DENND3A2RUS2 1198 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 MYMKA6NI61 221 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 K7ERI5 159 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 GADD45BO75293 160 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 TBCAO75347 108 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 UPP2O95045 317 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 ZNF202O95125 648 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 CXCL10P02778 98 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PFKMP08237 780 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 SLFN14P0C7P3 912 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PLS3P13797 630 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 DARSP14868 501 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 GUCY2CP25092 1073 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 BMP8BP34820 402 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PHKA2P46019 1235 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 KCNJ6P48051 423 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 DMP1Q13316 513 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 NAALADL2Q58DX5 795 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PLEKHG4Q58EX7 1191 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 HERC4Q5GLZ8 1057 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 C9orf50Q5SZB4 431 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PSRC1Q6PGN9 363 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 TSHZ1Q6ZSZ6 1077 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 METTL3Q86U44 580 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 LRRC15Q8TF66 581 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 APBB2Q92870 758 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 PAGE5Q96GU1 130 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 RNPC3Q96LT9 517 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 BLZF1Q9H2G9 400 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 CUEDC2Q9H467 287 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 KMT5AQ9NQR1 393 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 KCND2Q9NZV8 630 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 TBC1D7Q9P0N9 293 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 LARSQ9P2J5 1176 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 USP25Q9UHP3 1055 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 SLC4A7Q9Y6M7 1214 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 SQORQ9Y6N5 450 aa7.39□□□□□ -1.23
PPP4R1-207ENST00000578010 A0A1W2PPC1 479 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 RCCD1A6NED2 376 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 GOLGA6L22H0YM25 854 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 SLC16A4O15374 487 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 TRAK2O60296 914 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 ERLIN2O94905 339 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 AMHP03971 560 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 SFPQP23246 707 aaKnown RBP eCLIP7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 NAMPTP43490 491 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 NPTX2P47972 431 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 PTENP60484 403 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 ASIC1P78348 528 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 POU5F1BQ06416 359 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 STRN3Q13033 797 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 CAPSQ13938 189 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 MAPK6Q16659 721 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 FAM228AQ86W67 206 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 CCDC65Q8IXS2 484 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 GRAMD1CQ8IYS0 662 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 MYOCDQ8IZQ8 938 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 RNF169Q8NCN4 708 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 TMEM40Q8WWA1 233 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 BSNDQ8WZ55 320 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 HERVK_113Q902F9 699 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 ADAM2Q99965 735 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 C7orf25Q9BPX7 421 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 REEP2Q9BRK0 252 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 KIFC3Q9BVG8 833 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 FTHL17Q9BXU8 183 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 C2orf40Q9H1Z8 148 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 TNMDQ9H2S6 317 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 GOLPH3LQ9H4A5 285 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 MINDY3Q9H8M7 445 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 C17orf75Q9HAS0 396 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 IFT122Q9HBG6 1241 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 PARVGQ9HBI0 331 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 ERVK-5Q9HDB9 667 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 PANK4Q9NVE7 773 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 PCDHB7Q9Y5E2 793 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 GBF1Q92538 1859 aa7.38□□□□□ -1.23
PPP4R1-207ENST00000578010 SIP14410 1827 aa7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 EFCAB14O75071 495 aa7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 BAIAP3O94812 1187 aa7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 ATP2A2P16615 1042 aaKnown RBP7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 FECHP22830 423 aa7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 CASP1P29466 404 aa7.37□□□□□ -1.23
PPP4R1-207ENST00000578010 MATR3P43243 847 aaKnown RBP eCLIP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms