RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 NUBP1P53384 320 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 KRT25Q7Z3Z0 450 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 MINDY3Q9H8M7 445 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 WRAP73Q9P2S5 460 aaPredicted RBP22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 VAV3Q9UKW4 847 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 USTQ9Y2C2 406 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 FAN1Q9Y2M0 1017 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
SLC12A4-217ENST00000576462 ZFHX2Q9C0A1 2572 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 C2CD2LO14523 706 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 ALDH2P05091 517 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 CNPP09543 421 aaKnown RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 PPP2R5CQ13362 524 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 ASTLQ6HA08 431 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 GALNT17Q6IS24 598 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 CPLX2Q6PUV4 134 aaKnown RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 CCDC149Q6ZUS6 474 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 GPR149Q86SP6 731 aa22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 PSPC1Q8WXF1 523 aaKnown RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 ACSF2Q96CM8 615 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 ZNF274Q96GC6 653 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-217ENST00000576462 CACNA1HO95180 2353 aa22.2■■□□□ 1.15
SLC12A4-217ENST00000576462 CCDC194A0A1B0GVG4 234 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 NRP1O14786 923 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 DKC1O60832 514 aaKnown RBP eCLIP22.2■■□□□ 1.141e-8■■□□□ 13
SLC12A4-217ENST00000576462 CLCN4P51793 760 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 LAMTOR4Q0VGL1 99 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 UBXN11Q5T124 520 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 SRGAP1Q7Z6B7 1085 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 MRPL10Q7Z7H8 261 aaKnown RBP22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 FLCNQ8NFG4 579 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 MRPL17Q9NRX2 175 aaKnown RBP22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 CFAP54Q96N23 3096 aa22.2■■□□□ 1.14
SLC12A4-217ENST00000576462 MARCH6O60337 910 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 DTNBO60941 627 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 P4HBP07237 508 aaKnown RBP22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 MYBP10242 640 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 HOXA11P31270 313 aaPredicted RBP22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 OTOP3Q7RTS5 596 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 NEK8Q86SG6 692 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 FAM20AQ96MK3 541 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 LXNQ9BS40 222 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 TMEM175Q9BSA9 504 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 DHX33Q9H6R0 707 aaKnown RBP22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 KCNMB3Q9NPA1 279 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 KANSL3Q9P2N6 904 aa22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 PRG3Q9Y2Y8 225 aaPredicted RBP22.19■■□□□ 1.14
SLC12A4-217ENST00000576462 CNTNAP2Q9UHC6 1331 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 CCNT1O60563 726 aaKnown RBP22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 YWHABP31946 246 aaKnown RBP22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 RFC5P40937 340 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 AK2P54819 239 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 NCAPH2Q6IBW4 605 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 ASCL5Q7RTU5 278 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 RNF149Q8NC42 400 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 RGL1Q9NZL6 768 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 DMDP11532 3685 aa22.18■■□□□ 1.14
SLC12A4-217ENST00000576462 LILRB3O75022 631 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 URODP06132 367 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 ITGA4P13612 1032 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 OR1G1P47890 313 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 EMC2Q15006 297 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 XKR9Q5GH70 373 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 TAS1R1Q7RTX1 841 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 EXOC8Q8IYI6 725 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 DYDC2Q96IM9 177 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 SNX27Q96L92 541 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 PHF20Q9BVI0 1012 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 MAN1C1Q9NR34 630 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 GJB4Q9NTQ9 266 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 STK39Q9UEW8 545 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 PLXNA3P51805 1871 aa22.17■■□□□ 1.14
SLC12A4-217ENST00000576462 ZBTB39O15060 712 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 ERLIN2O94905 339 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 SOD2P04179 222 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 NCLP19338 710 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 CLCN5P51795 746 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 CYP4A11Q02928 519 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 TDGQ13569 410 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 CTTNQ14247 550 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 EPHA7Q15375 998 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 CWF19L1Q69YN2 538 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 PPP4R3AQ6IN85 833 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 PIK3AP1Q6ZUJ8 805 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 OTUD6AQ7L8S5 288 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 FERMT3Q86UX7 667 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 POTEDQ86YR6 584 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 FAM177A1Q8N128 213 aaPredicted RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 SMG8Q8ND04 991 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 TCP11Q8WWU5 503 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 HAS1Q92839 578 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 EIF2AQ9BY44 585 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 PDRG1Q9NUG6 133 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 MARCH5Q9NX47 278 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 FBXL21Q9UKT6 434 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 PPME1Q9Y570 386 aa22.16■■□□□ 1.14
SLC12A4-217ENST00000576462 DENND4AQ7Z401 1863 aa22.15■■□□□ 1.14
SLC12A4-217ENST00000576462 PROB1E7EW31 1015 aa22.15■■□□□ 1.14
SLC12A4-217ENST00000576462 GCFC2P16383 781 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms